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ZNF222 zinc finger protein 222 [ Homo sapiens (human) ]

Gene ID: 7673, updated on 11-Sep-2014
Official Symbol
ZNF222provided by HGNC
Official Full Name
zinc finger protein 222provided by HGNC
Primary source
HGNC:HGNC:13015
See related
Ensembl:ENSG00000159885; HPRD:15748; Vega:OTTHUMG00000182309
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
See ZNF222 in Epigenomics, MapViewer
Location:
19q13.2
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 19 NC_000019.10 (44025342..44033110)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (44529494..44537263)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 155 Neighboring gene uncharacterized LOC101928063 Neighboring gene zinc finger protein 230 Neighboring gene zinc finger protein 223 Neighboring gene zinc finger protein 284

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Gene Expression, organism-specific biosystem (from REACTOME)
    Gene Expression, organism-specific biosystemGene Expression covers the pathways by which genomic DNA is transcribed to yield RNA, the regulation of these transcription processes, and the pathways by which newly-made RNA Transcripts are process...
  • Generic Transcription Pathway, organism-specific biosystem (from REACTOME)
    Generic Transcription Pathway, organism-specific biosystemOVERVIEW OF TRANSCRIPTION REGULATION: Detailed studies of gene transcription regulation in a wide variety of eukaryotic systems has revealed the general principles and mechanisms by which cell- or t...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
zinc finger protein 222
Names
zinc finger protein 222

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001129996.1NP_001123468.1  zinc finger protein 222 isoform 1

    See proteins identical to NP_001123468.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and it encodes the longer protein (isoform 1).
    Source sequence(s)
    BC030261, DB185422
    Consensus CDS
    CCDS46098.1
    UniProtKB/Swiss-Prot
    Q9UK12
    Related
    ENSP00000375822, OTTHUMP00000268902, ENST00000391960, OTTHUMT00000460466
    Conserved Domains (3) summary
    cd07765
    Location:1755
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:183315
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:284306
    zf-H2C2_2; Zinc-finger double domain
  2. NM_013360.2NP_037492.2  zinc finger protein 222 isoform 2

    See proteins identical to NP_037492.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. This variant encodes isoform 2 which is 40 aa shorter than isoform 1.
    Source sequence(s)
    AF187988, BC030261, DB185422
    Consensus CDS
    CCDS33045.1
    UniProtKB/Swiss-Prot
    Q9UK12
    Related
    ENSP00000187879, OTTHUMP00000268901, ENST00000187879, OTTHUMT00000460465
    Conserved Domains (2) summary
    cd07765
    Location:846
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    pfam13465
    Location:244266
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000019.10 

    Range
    44025342..44033110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005259208.1XP_005259265.1  

    Conserved Domains (2) summary
    cd07765
    Location:846
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    pfam13465
    Location:275297
    zf-H2C2_2; Zinc-finger double domain
  2. XM_005259209.1XP_005259266.1  

    Conserved Domains (2) summary
    cd07765
    Location:1755
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    pfam13465
    Location:253275
    zf-H2C2_2; Zinc-finger double domain

Alternate HuRef

Genomic

  1. AC_000151.1 

    Range
    40961704..40969472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018930.2 

    Range
    44531369..44539126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)