U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    KPNB1 karyopherin subunit beta 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 491042, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    KPNB1provided by VGNC
    Official Full Name
    karyopherin subunit beta 1provided by VGNC
    Primary source
    VGNC:VGNC:42506
    See related
    Ensembl:ENSCAFG00845015226
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 9
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (24796218..24823411)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (23470348..23497535)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (23954771..23981965)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (23566722..23593892)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (23827962..23855184)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene aminopeptidase puromycin sensitive Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene uncharacterized LOC111097362 Neighboring gene TBK1 binding protein 1 Neighboring gene T-box transcription factor 21

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Assembly of the β4-Integrin Interactome Based on Proximal Biotinylation in the Presence and Absence of Heterodimerization. Myllymäki SM, et al. Mol Cell Proteomics, 2019 Feb. PMID 30404858, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear import signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear localization sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    importin subunit beta-1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      24796218..24823411
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038676690.1 → XP_038532618.1  importin subunit beta-1

      UniProtKB/TrEMBL
      A0A8C0LGT2, A0A8C0M352, A0A8I3NZP6
      Related
      ENSCAFP00845021394.1, ENSCAFT00845027196.1
      Conserved Domains (2) summary
      COG5215
      Location:2 → 871
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      sd00044
      Location:323 → 354
      HEAT; HEAT repeat [structural motif]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      23566722..23593892
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038485743.1 → XP_038341671.1  importin subunit beta-1

      Conserved Domains (2) summary
      COG5215
      Location:2 → 871
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      sd00044
      Location:323 → 354
      HEAT; HEAT repeat [structural motif]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      23827962..23855184
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038611496.1 → XP_038467424.1  importin subunit beta-1

      Conserved Domains (2) summary
      COG5215
      Location:2 → 871
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      sd00044
      Location:323 → 354
      HEAT; HEAT repeat [structural motif]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      23954771..23981965
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038547515.1 → XP_038403443.1  importin subunit beta-1

      UniProtKB/TrEMBL
      A0A8C0LGT2, A0A8C0M352, A0A8I3NZP6
      Conserved Domains (2) summary
      COG5215
      Location:2 → 871
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      sd00044
      Location:323 → 354
      HEAT; HEAT repeat [structural motif]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      23470348..23497535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_548162.6 → XP_548162.2  importin subunit beta-1

      See identical proteins and their annotated locations for XP_548162.2

      UniProtKB/TrEMBL
      A0A8C0LGT2, A0A8C0M352, A0A8I3NZP6
      Conserved Domains (2) summary
      COG5215
      Location:2 → 871
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      sd00044
      Location:323 → 354
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.