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    BAZ1B bromodomain adjacent to zinc finger domain 1B [ Canis lupus familiaris (dog) ]

    Gene ID: 479719, updated on 5-Mar-2024

    Summary

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    Official Symbol
    BAZ1Bprovided by VGNC
    Official Full Name
    bromodomain adjacent to zinc finger domain 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:38390
    See related
    Ensembl:ENSCAFG00845003514
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See BAZ1B in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (6524701..6594233)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (8406933..8475941)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (6625515..6694618)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (6514050..6569390)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (6461859..6531708)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene ATPase inhibitor, mitochondrial-like Neighboring gene BAF chromatin remodeling complex subunit BCL7B Neighboring gene frizzled class receptor 9 Neighboring gene FKBP prolyl isomerase family member 6 (inactive)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H2AXY142 kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of WICH complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine-protein kinase BAZ1B
    XP_038336393.1
    XP_038395049.1
    XP_038459135.1
    XP_038523831.1
    XP_536845.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      6524701..6594233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038667903.1 → XP_038523831.1  tyrosine-protein kinase BAZ1B isoform X1

      UniProtKB/TrEMBL
      A0A8C0N341, A0A8I3MI95, A0A8P0SWD2
      Related
      ENSCAFP00845004974.1, ENSCAFT00845006265.1
      Conserved Domains (7) summary
      cd05505
      Location:1343 → 1439
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:604 → 668
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1185 → 1230
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam17380
      Location:763 → 861
      DUF5401; Family of unknown function (DUF5401)
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:727 → 767
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam15613
      Location:898 → 1024
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      6514050..6569390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038480465.1 → XP_038336393.1  tyrosine-protein kinase BAZ1B isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      6461859..6531708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603207.1 → XP_038459135.1  tyrosine-protein kinase BAZ1B isoform X1

      Conserved Domains (7) summary
      cd05505
      Location:1343 → 1439
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:604 → 668
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1185 → 1230
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam17380
      Location:763 → 861
      DUF5401; Family of unknown function (DUF5401)
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:727 → 767
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam15613
      Location:898 → 1024
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      6625515..6694618
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539121.1 → XP_038395049.1  tyrosine-protein kinase BAZ1B isoform X1

      UniProtKB/TrEMBL
      A0A8C0N341, A0A8I3MI95, A0A8P0SWD2
      Conserved Domains (7) summary
      cd05505
      Location:1343 → 1439
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:604 → 668
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1185 → 1230
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam17380
      Location:763 → 861
      DUF5401; Family of unknown function (DUF5401)
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:727 → 767
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam15613
      Location:898 → 1024
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      8406933..8475941
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_536845.7 → XP_536845.4  tyrosine-protein kinase BAZ1B isoform X1

      UniProtKB/TrEMBL
      A0A8C0N341, A0A8I3MI95, A0A8P0SWD2
      Conserved Domains (7) summary
      cd05505
      Location:1343 → 1439
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:604 → 668
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1185 → 1230
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam17380
      Location:763 → 861
      DUF5401; Family of unknown function (DUF5401)
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:727 → 767
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam15613
      Location:898 → 1024
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    Nucleotide Protein
    Heading Accession and Version

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