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    GRIA1 glutamate receptor, ionotropic, AMPA 1 [ Homo sapiens (human) ]

    Gene ID: 2890, updated on 11-May-2013
    Official Symbol
    GRIA1provided by HGNC
    Official Full Name
    glutamate receptor, ionotropic, AMPA 1provided by HGNC
    Primary source
    HGNC:4571
    See related
    Ensembl:ENSG00000155511; HPRD:00695; MIM:138248; Vega:OTTHUMG00000130148
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GLUH1; GLUR1; GLURA; GluA1; HBGR1
    Summary
    Glutamate receptors are the predominant excitatory neurotransmitter receptors in the mammalian brain and are activated in a variety of normal neurophysiologic processes. These receptors are heteromeric protein complexes with multiple subunits, each possessing transmembrane regions, and all arranged to form a ligand-gated ion channel. The classification of glutamate receptors is based on their activation by different pharmacologic agonists. This gene belongs to a family of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate (AMPA) receptors. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
    Location :
    5q31.1
    Sequence :
    Chromosome: 5; NC_000005.9 (152870084..153193429)
    See GRIA1 in Epigenomics, MapViewer

    Chromosome 5 - NC_000005.9Genomic Context describing neighboring genes Neighboring gene ribosomal protein L36a pseudogene 20 Neighboring gene transfer RNA cysteine 32 (anticodon ACA) pseudogene Neighboring gene family with sequence similarity 114, member A2 Neighboring gene microfibrillar-associated protein 3

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description
    NP_000818.1 NP_001501.1 GRID2    BIND  PubMed GluR1 interacts with GluR-delta-2 
    P42261 Q9Y698 CACNG2    HPRD  PubMed  
    P42261 Q13555 CAMK2G    HPRD  PubMed  
    P42261 P27824 CANX    HPRD  PubMed  
    P42261 Q14790 CASP8    HPRD  PubMed  
    P42261 P25025 CXCR2    HPRD  PubMed  
    P42261 Q12959 DLG1    HPRD  PubMed  
    P42261 Q9H4G0 EPB41L1    HPRD  PubMed  
    P42261 O43491 EPB41L2    HPRD  PubMed  
    P42261 P42261 GRIA1    HPRD  PubMed  
    P42261 P48058 GRIA4    HPRD  PubMed  
    P42261 O43424 GRID2    HPRD  PubMed  
    P42261 Q13002 GRIK2    HPRD  PubMed  
    P42261 Q4V328 GRIPAP1    HPRD  PubMed  
    P42261 Q86YM7 HOMER1    HPRD  PubMed  
    P42261 P11021 HSPA5    HPRD  PubMed  
    P42261 Q9NRD5 PICK1    HPRD  PubMed  
    P42261 P17612 PRKACA    HPRD  PubMed  
    P42261 P17252 PRKCA    HPRD  PubMed  
    P42261 O00560 SDCBP    HPRD  PubMed  
    P42261 Q13501 SQSTM1    HPRD  PubMed  
    P42261 TANC TANC1    HPRD  PubMed  
    P42261 P48995 TRPC1    HPRD  PubMed  
    BioGRID:109147 BioGRID:118937 ANAPC2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:115648 CACNG2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:108083 DLG1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:109147 BioGRID:108350 EPB41L1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:108351 EPB41L2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:109147 BioGRID:119489 FZR1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:109148 GRIA2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:109150 GRIA4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:109152 GRID2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:109155 GRIK2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:116995 GRIP1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:109147 BioGRID:114845 HOMER1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:110728 MYO5A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:110811 NEDD4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:114849 PICK1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:109147 BioGRID:114299 RAB11A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:109147 BioGRID:112287 SDCBP    BioGRID  PubMed Reconstituted Complex 
    BioGRID:109147 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-Western 
    • Activation of AMPA receptors, organism-specific biosystem (from REACTOME)
      Activation of AMPA receptors, organism-specific biosystemAMPA receptors are functionally either Ca permeable or Ca impermeable based on the subunit composition. Ca permeability is determined by GluR2 subunit which undergoes post-transcriptional RNA editin...
    • Activation of NMDA receptor upon glutamate binding and postsynaptic events, organism-specific biosystem (from REACTOME)
      Activation of NMDA receptor upon glutamate binding and postsynaptic events, organism-specific biosystemNMDA receptors are a subtype of ionotropic glutamate receptors that are specifically activated by a glutamate agonist N-methyl-D-aspartate (NMDA). Activation of NMDA receptor involves opening of the ...
    • Amphetamine addiction, organism-specific biosystem (from KEGG)
      Amphetamine addiction, organism-specific biosystemAmphetamine is a psychostimulant drug that exerts persistent addictive effects. Most addictive drugs increase extracellular concentrations of dopamine (DA) in nucleus accumbens (NAc) and medial prefr...
    • Amphetamine addiction, conserved biosystem (from KEGG)
      Amphetamine addiction, conserved biosystemAmphetamine is a psychostimulant drug that exerts persistent addictive effects. Most addictive drugs increase extracellular concentrations of dopamine (DA) in nucleus accumbens (NAc) and medial prefr...
    • Amyotrophic lateral sclerosis (ALS), organism-specific biosystem (from KEGG)
      Amyotrophic lateral sclerosis (ALS), organism-specific biosystemAmyotrophic lateral sclerosis (ALS) is a progressive, lethal, degenerative disorder of motor neurons. The hallmark of this disease is the selective death of motor neurons in the brain and spinal cord...
    • Amyotrophic lateral sclerosis (ALS), conserved biosystem (from KEGG)
      Amyotrophic lateral sclerosis (ALS), conserved biosystemAmyotrophic lateral sclerosis (ALS) is a progressive, lethal, degenerative disorder of motor neurons. The hallmark of this disease is the selective death of motor neurons in the brain and spinal cord...
    • BDNF signaling pathway, organism-specific biosystem (from WikiPathways)
      BDNF signaling pathway, organism-specific biosystemBrain-derived neurotrophic factor (BDNF) is a neurotrophin essential for growth, differentiation, plasticity, and survival of neurons. BDNF is also required for processes such as energy metabolism, b...
    • Circadian entrainment, organism-specific biosystem (from KEGG)
      Circadian entrainment, organism-specific biosystemCircadian entrainment is a fundamental property by which the period of the internal biological clock is entrained by recurring exogenous signals, such that the organism's endocrine and behavioral rhy...
    • Circadian entrainment, conserved biosystem (from KEGG)
      Circadian entrainment, conserved biosystemCircadian entrainment is a fundamental property by which the period of the internal biological clock is entrained by recurring exogenous signals, such that the organism's endocrine and behavioral rhy...
    • Dopaminergic synapse, organism-specific biosystem (from KEGG)
      Dopaminergic synapse, organism-specific biosystemDopamine (DA) is an important and prototypical slow neurotransmitter in the mammalian brain, where it controls a variety of functions including locomotor activity, motivation and reward, learning an...
    • Dopaminergic synapse, conserved biosystem (from KEGG)
      Dopaminergic synapse, conserved biosystemDopamine (DA) is an important and prototypical slow neurotransmitter in the mammalian brain, where it controls a variety of functions including locomotor activity, motivation and reward, learning an...
    • EPHB forward signaling, organism-specific biosystem (from Pathway Interaction Database)
      EPHB forward signaling, organism-specific biosystem
      EPHB forward signaling
    • Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity, organism-specific biosystem (from REACTOME)
      Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity, organism-specific biosystemExcitatory synaptic transmission in the brain is carried out by glutamate receptors through the activation of both ionotropic and metabotropic receptors. Ionotropic glutamate receptors are of three ...
    • Glutamatergic synapse, organism-specific biosystem (from KEGG)
      Glutamatergic synapse, organism-specific biosystemGlutamate is the major excitatory neurotransmitter in the mammalian central nervous system(CNS). Glutamate is packaged into synaptic vesicles in the presynaptic terminal. Once released into the synap...
    • Glutamatergic synapse, conserved biosystem (from KEGG)
      Glutamatergic synapse, conserved biosystemGlutamate is the major excitatory neurotransmitter in the mammalian central nervous system(CNS). Glutamate is packaged into synaptic vesicles in the presynaptic terminal. Once released into the synap...
    • Hypothetical Network for Drug Addiction, organism-specific biosystem (from WikiPathways)
      Hypothetical Network for Drug Addiction, organism-specific biosystemAdapted from figure 2 in [http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.0040002 Li et al.].
    • Long-term depression, organism-specific biosystem (from KEGG)
      Long-term depression, organism-specific biosystemCerebellar long-term depression (LTD), thought to be a molecular and cellular basis for cerebellar learning, is a process involving a decrease in the synaptic strength between parallel fiber (PF) and...
    • Long-term depression, conserved biosystem (from KEGG)
      Long-term depression, conserved biosystemCerebellar long-term depression (LTD), thought to be a molecular and cellular basis for cerebellar learning, is a process involving a decrease in the synaptic strength between parallel fiber (PF) and...
    • Long-term potentiation, organism-specific biosystem (from KEGG)
      Long-term potentiation, organism-specific biosystemHippocampal long-term potentiation (LTP), a long-lasting increase in synaptic efficacy, is the molecular basis for learning and memory. Tetanic stimulation of afferents in the CA1 region of the hippo...
    • Long-term potentiation, conserved biosystem (from KEGG)
      Long-term potentiation, conserved biosystemHippocampal long-term potentiation (LTP), a long-lasting increase in synaptic efficacy, is the molecular basis for learning and memory. Tetanic stimulation of afferents in the CA1 region of the hippo...
    • Neuroactive ligand-receptor interaction, organism-specific biosystem (from KEGG)
      Neuroactive ligand-receptor interaction, organism-specific biosystem
      Neuroactive ligand-receptor interaction
    • Neuroactive ligand-receptor interaction, conserved biosystem (from KEGG)
      Neuroactive ligand-receptor interaction, conserved biosystem
      Neuroactive ligand-receptor interaction
    • Neuronal System, organism-specific biosystem (from REACTOME)
      Neuronal System, organism-specific biosystemThe human brain contains at least 100 billion neurons, each with the ability to influence many other cells. Clearly, highly sophisticated and efficient mechanisms are needed to enable communication a...
    • Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell, organism-specific biosystem (from REACTOME)
      Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell, organism-specific biosystemThe neurotransmitter in the synaptic cleft released by the pre-synaptic neuron binds specific receptors located on the post-synaptic terminal. These receptors are either ion channels or G protein cou...
    • Nicotine addiction, organism-specific biosystem (from KEGG)
      Nicotine addiction, organism-specific biosystemNicotine is one of the main psychoactive ingredients in tobacco that contributes to the harmful tobacco smoking habit. A common feature of addictive drugs, including nicotine, is that they increase d...
    • Nicotine addiction, conserved biosystem (from KEGG)
      Nicotine addiction, conserved biosystemNicotine is one of the main psychoactive ingredients in tobacco that contributes to the harmful tobacco smoking habit. A common feature of addictive drugs, including nicotine, is that they increase d...
    • Retrograde endocannabinoid signaling, organism-specific biosystem (from KEGG)
      Retrograde endocannabinoid signaling, organism-specific biosystemEndogenous cannabinoids (endocannabinoids) serve as retrograde messengers at synapses in various regions of the brain. The family of endocannabinoids includes at least five derivatives of arachidonic...
    • Retrograde endocannabinoid signaling, conserved biosystem (from KEGG)
      Retrograde endocannabinoid signaling, conserved biosystemEndogenous cannabinoids (endocannabinoids) serve as retrograde messengers at synapses in various regions of the brain. The family of endocannabinoids includes at least five derivatives of arachidonic...
    • Trafficking of AMPA receptors, organism-specific biosystem (from REACTOME)
      Trafficking of AMPA receptors, organism-specific biosystemRepetitive presynaptic activity causes long lasting changes in the postsynaptic transmission by changing the type and the number of AMPA receptors. These changes are brought about by trafficking mec...
    • Trafficking of GluR2-containing AMPA receptors, organism-specific biosystem (from REACTOME)
      Trafficking of GluR2-containing AMPA receptors, organism-specific biosystemTrafficking of GluR2-containing receptors is governed by protein protein interactions that are regulated by phosphorylation events. GluR2 binds NSF and AP2 in the proximal C terminal region and binds...
    • Transmission across Chemical Synapses, organism-specific biosystem (from REACTOME)
      Transmission across Chemical Synapses, organism-specific biosystemChemical synapses are specialized junctions that are used for communication between neurons, neurons and muscle or gland cells. The synapse involves a pre-synaptic neuron and a post-synaptic neuron,...
    • Unblocking of NMDA receptor, glutamate binding and activation, organism-specific biosystem (from REACTOME)
      Unblocking of NMDA receptor, glutamate binding and activation, organism-specific biosystemAt resting membrane potential the NMDA receptor is blocked by extracellular Mg2+ ions and therefore is not activated in this state by ligands (glutamate, glycine, NMDA). The voltage block is removed ...

    Markers

    Homology

    Clone Names

    • MGC133252

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    PDZ domain binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity IDA
    Inferred from Direct Assay
    more info
     
    extracellular-glutamate-gated ion channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    glutamate receptor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    kainate selective glutamate receptor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
     
    Process Evidence Code Pubs
    signal transduction TAS
    Traceable Author Statement
    more info
    PubMed 
    synaptic transmission TAS
    Traceable Author Statement
    more info
     
    Component Evidence Code Pubs
    alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    cell surface ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    dendrite ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    dendritic spine ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    endocytic vesicle membrane TAS
    Traceable Author Statement
    more info
     
    endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    neuron spine ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    neuronal cell body ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    plasma membrane TAS
    Traceable Author Statement
    more info
     
    postsynaptic density ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    glutamate receptor 1
    Names
    glutamate receptor 1
    AMPA 1
    gluR-1
    gluR-A
    gluR-K1
    AMPA-selective glutamate receptor 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_000827.3NP_000818.2  glutamate receptor 1 isoform 1 precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) encodes isoform 1.
      Source sequence(s)
      AB209094, AK310189, AL120214, DC335107, M81886, X58633
      Consensus CDS
      CCDS4322.1
      UniProtKB/Swiss-Prot
      P42261
      UniProtKB/TrEMBL
      Q59GL5
      Related
      ENSP00000285900, OTTHUMP00000160643, ENST00000285900, OTTHUMT00000252456
      Conserved Domains (5) summary
      cd00134
      Location:430526
      Blast Score: 159
      PBPb; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic ...
      cd06390
      Location:26389
      Blast Score: 2033
      PBP1_iGluR_AMPA_GluR1; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor
      pfam00060
      Location:538817
      Blast Score: 897
      Lig_chan; Ligand-gated ion channel
      smart00079
      Location:646782
      Blast Score: 436
      PBPe; Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
      pfam01094
      Location:37372
      Blast Score: 568
      ANF_receptor; Receptor family ligand binding region
    2. NM_001114183.1NP_001107655.1  glutamate receptor 1 isoform 2 precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) has a different coding exon in the 3' region, as compared to variant 1. The resulting isoform (2) is the same length but has a different internal segment, as compared to isoform 1.
      Source sequence(s)
      AB209094, AL120214, DC335107, M64752
      Consensus CDS
      CCDS47318.1
      UniProtKB/Swiss-Prot
      P42261
      UniProtKB/TrEMBL
      Q59GL5
      Conserved Domains (5) summary
      cd00134
      Location:430526
      Blast Score: 159
      PBPb; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic ...
      cd06390
      Location:26389
      Blast Score: 2035
      PBP1_iGluR_AMPA_GluR1; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor
      pfam00060
      Location:538817
      Blast Score: 902
      Lig_chan; Ligand-gated ion channel
      smart00079
      Location:646782
      Blast Score: 437
      PBPe; Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
      pfam01094
      Location:37372
      Blast Score: 568
      ANF_receptor; Receptor family ligand binding region
    3. NM_001258019.1NP_001244948.1  glutamate receptor 1 isoform 3 precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1.
      Source sequence(s)
      AB209094, AK295827, AL120214, DC335107
      Consensus CDS
      CCDS58986.1
      UniProtKB/Swiss-Prot
      P42261
      UniProtKB/TrEMBL
      Q59GL5
      Conserved Domains (5) summary
      cd00134
      Location:350440
      Blast Score: 158
      PBPb; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic ...
      pfam00060
      Location:458737
      Blast Score: 900
      Lig_chan; Ligand-gated ion channel
      smart00079
      Location:566702
      Blast Score: 436
      PBPe; Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
      pfam01094
      Location:64292
      Blast Score: 361
      ANF_receptor; Receptor family ligand binding region
      cl10011
      Location:73309
      Blast Score: 1287
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
    4. NM_001258020.1NP_001244949.1  glutamate receptor 1 isoform 4

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence and has an alternate in-frame exon in place of another exon of the same size. The resulting isoform (4) is shorter at the N-terminus and has a different sequence (but same length) segment in the C-terminus compared to isoform 1.
      Source sequence(s)
      AB209094, AL120214, DC335107
      UniProtKB/TrEMBL
      Q59GL5
      Conserved Domains (5) summary
      cd00134
      Location:335431
      Blast Score: 158
      PBPb; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic ...
      pfam00060
      Location:443722
      Blast Score: 907
      Lig_chan; Ligand-gated ion channel
      smart00079
      Location:551687
      Blast Score: 437
      PBPe; Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
      pfam01094
      Location:1277
      Blast Score: 462
      ANF_receptor; Receptor family ligand binding region
      cl10011
      Location:1294
      Blast Score: 1639
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
    5. NM_001258021.1NP_001244950.1  glutamate receptor 1 isoform 5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) has an alternate exon in place of the 5'-most exon of variant 1. The resulting isoform (5) has a longer and distinct N-terminus compared to isoform 1.
      Source sequence(s)
      AB209094, AK295184, AK295827, AK315934, AL120214
      Consensus CDS
      CCDS58987.1
      UniProtKB/TrEMBL
      B7Z2W8
      UniProtKB/TrEMBL
      B7Z9G9
      UniProtKB/TrEMBL
      E7ESV8
      UniProtKB/Swiss-Prot
      P42261
      UniProtKB/TrEMBL
      Q59GL5
      Related
      ENSP00000428994, OTTHUMP00000224242, ENST00000518783, OTTHUMT00000373902
      Conserved Domains (5) summary
      cd00134
      Location:440536
      Blast Score: 160
      PBPb; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic ...
      cd06390
      Location:36399
      Blast Score: 2021
      PBP1_iGluR_AMPA_GluR1; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor
      pfam00060
      Location:548827
      Blast Score: 897
      Lig_chan; Ligand-gated ion channel
      smart00079
      Location:656792
      Blast Score: 437
      PBPe; Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
      pfam01094
      Location:47382
      Blast Score: 574
      ANF_receptor; Receptor family ligand binding region
    6. NM_001258022.1NP_001244951.1  glutamate receptor 1 isoform 6

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) has an alternate exon in place of the 5'-most exon of variant 1 and has an alternate in-frame exon in place of another exon of the same size. The resulting isoform (6) has a longer and distinct N-terminus and has a different sequence (but same length) segment in the C-terminus compared to isoform 1.
      Source sequence(s)
      AB209094, AK295184, AK315934, AL120214
      Consensus CDS
      CCDS58988.1
      UniProtKB/TrEMBL
      B7Z2W8
      UniProtKB/TrEMBL
      B7Z9G9
      UniProtKB/TrEMBL
      Q59GL5
      Conserved Domains (5) summary
      cd00134
      Location:440536
      Blast Score: 161
      PBPb; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic ...
      cd06390
      Location:36399
      Blast Score: 2023
      PBP1_iGluR_AMPA_GluR1; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor
      pfam00060
      Location:548827
      Blast Score: 903
      Lig_chan; Ligand-gated ion channel
      smart00079
      Location:656792
      Blast Score: 438
      PBPe; Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
      pfam01094
      Location:47382
      Blast Score: 574
      ANF_receptor; Receptor family ligand binding region
    7. NM_001258023.1NP_001244952.1  glutamate receptor 1 isoform 7

      Status: REVIEWED

      Description
      Transcript Variant: This variant (7) has an alternate exon in place of the 5'-most exon of variant 1. The resulting isoform (7) is shorter at the N-terminus compared to isoform 1.
      Source sequence(s)
      AB209094, AK295039, AL120214
      Consensus CDS
      CCDS58989.1
      UniProtKB/Swiss-Prot
      P42261
      UniProtKB/TrEMBL
      Q59GL5
      Conserved Domains (5) summary
      cd00134
      Location:361457
      Blast Score: 158
      PBPb; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic ...
      pfam00060
      Location:469748
      Blast Score: 898
      Lig_chan; Ligand-gated ion channel
      smart00079
      Location:577713
      Blast Score: 435
      PBPe; Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
      pfam01094
      Location:1303
      Blast Score: 516
      ANF_receptor; Receptor family ligand binding region
      cl10011
      Location:1320
      Blast Score: 1790
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

    RNA

    1. NR_047578.1 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (8) lacks an alternate 5' exon and an alternate 3' exon compared to variant 1. The resulting transcript is a candidate for nonsense-mediated mRNA decay (NMD) and is therefore thought to be non-protein coding.
      Source sequence(s)
      AB209094, AC091960, AK294011, AL120214, DC335107

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000005.9 Reference GRCh37.p10 Primary Assembly

      Range
      152870084..153193429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000137.1 Alternate HuRef

      Range
      148010721..148334111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018916.1 Alternate CHM1_1.0

      Range
      153144637..153468010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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