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    IGKV3D-7 immunoglobulin kappa variable 3D-7 [ Homo sapiens (human) ]

    Gene ID: 28877, updated on 23-Nov-2023

    Summary

    Official Symbol
    IGKV3D-7provided by HGNC
    Official Full Name
    immunoglobulin kappa variable 3D-7provided by HGNC
    Primary source
    HGNC:HGNC:5829
    See related
    Ensembl:ENSG00000228325 IMGT/GENE-DB:IGKV3D-7; AllianceGenome:HGNC:5829
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    L25; IGKV3D7
    Summary
    Predicted to be involved in immune response. Predicted to be located in plasma membrane. Predicted to be part of immunoglobulin complex. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

    Location:
    2p11.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (90234837..90235368)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (90790416..90790947)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (90273704..90274235)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa locus Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:90527913-90528424 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:90519311-90519810 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:90518809-90519310 Neighboring gene immunoglobulin kappa variable 1D-43 Neighboring gene immunoglobulin kappa variable 1/OR2-118 (pseudogene) Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:90470323-90470902 Neighboring gene uncharacterized LOC101926946 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90475288-90476036 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90476879-90477408 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90480262-90481249 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90481250-90482236 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90482237-90483224 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90484749-90485520 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90485521-90486290 Neighboring gene immunoglobulin kappa variable 1D-8

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in immunoglobulin production IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of immunoglobulin complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_000833.2 

      Range
      13431..13962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      90234837..90235368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      90790416..90790947
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)