These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_009784.1 RefSeqGene
- Range
- 5001..17841
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001081560.1 → NP_001075029.1 myotonin-protein kinase isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences in the presence and absence of exons at its 5' end and in the CDS, compared to variant 1. These differences produce a distinct 5' UTR, cause translation initiation at an alternative start codon, and the loss of an in-frame portion of the coding region, compared to variant 1. The encoded protein (isoform 3, also known as isoform 11) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC011530, AV655848, BC062553, L19268
- Consensus CDS
-
CCDS46118.1
- UniProtKB/TrEMBL
-
E5KR07
- UniProtKB/Swiss-Prot
-
Q09013
- Related
- ENSP00000413417, OTTHUMP00000268968, ENST00000447742, OTTHUMT00000460575
- Conserved Domains (3) summary
-
- pfam08826
Location:465 – 525
Blast Score: 246
- DMPK_coil; DMPK coiled coil domain like
- cd05597
Location:69 – 401
Blast Score: 1662
- STKc_DMPK_like; Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases
- smart00220
Location:71 – 339
Blast Score: 701
- S_TKc; Serine/Threonine protein kinases, catalytic domain
-
NM_001081562.1 → NP_001075031.1 myotonin-protein kinase isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) has multiple differences in the presence and absence of exons at its 5' end and in the CDS, compared to variant 1. These differences produce a distinct 5' UTR, and cause translation initiation at an alternative start codon, the loss of an in-frame portion of the coding region and a frameshift in the 3' coding region, compared to variant 1. The encoded protein (isoform 4) has a distinct N-terminus and a unique C-terminus, and is shorter than isoform 1.
- Source sequence(s)
-
AC011530, AV655848, BC062553, S72883
- Consensus CDS
-
CCDS46117.1
- UniProtKB/TrEMBL
-
E5KR05
- UniProtKB/Swiss-Prot
-
Q09013
- Related
- ENSP00000401753, OTTHUMP00000268969, ENST00000458663, OTTHUMT00000460576
- Conserved Domains (3) summary
-
- pfam08826
Location:465 – 525
Blast Score: 249
- DMPK_coil; DMPK coiled coil domain like
- cd05597
Location:69 – 401
Blast Score: 1666
- STKc_DMPK_like; Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases
- smart00220
Location:71 – 339
Blast Score: 709
- S_TKc; Serine/Threonine protein kinases, catalytic domain
-
NM_001081563.1 → NP_001075032.1 myotonin-protein kinase isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1), also known as Form I.
- Source sequence(s)
-
AC011530, AV655848, BC062553, M87312
- Consensus CDS
-
CCDS46119.1
- UniProtKB/TrEMBL
-
E5KR08
- UniProtKB/Swiss-Prot
-
Q09013
- Related
- ENSP00000345997, OTTHUMP00000269417, ENST00000343373, OTTHUMT00000461638
- Conserved Domains (3) summary
-
- pfam08826
Location:480 – 540
Blast Score: 258
- DMPK_coil; DMPK coiled coil domain like
- cd05597
Location:79 – 416
Blast Score: 1645
- STKc_DMPK_like; Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases
- smart00220
Location:81 – 349
Blast Score: 706
- S_TKc; Serine/Threonine protein kinases, catalytic domain
-
NM_004409.3 → NP_004400.4 myotonin-protein kinase isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences in the presence and absence of exons at its 5' end, compared to variant 1. These differences produce a distinct 5' UTR and cause translation initiation at an alternative start codon, compared to variant 1. The encoded protein (isoform 2, also known as isoform 9) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC011530, AV655848, BC062553, BG706056
- Consensus CDS
-
CCDS12674.1
- UniProtKB/TrEMBL
-
E5KR06
- UniProtKB/Swiss-Prot
-
Q09013
- Related
- ENSP00000291270, OTTHUMP00000268966, ENST00000291270, OTTHUMT00000460572
- Conserved Domains (3) summary
-
- pfam08826
Location:470 – 530
Blast Score: 247
- DMPK_coil; DMPK coiled coil domain like
- cd05597
Location:69 – 406
Blast Score: 1647
- STKc_DMPK_like; Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases
- smart00220
Location:71 – 339
Blast Score: 702
- S_TKc; Serine/Threonine protein kinases, catalytic domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p10 Primary Assembly
Genomic
-
NC_000019.9 Reference GRCh37.p10 Primary Assembly
- Range
- 46272975..46285815, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000151.1 Alternate HuRef
- Range
- 42701722..42714534, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate CHM1_1.0
Genomic
-
NC_018930.1 Alternate CHM1_1.0
- Range
- 46462792..46474657, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)