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    SUPT4H1P1 SPT4 homolog, DSIF elongation factor subunit pseudogene [ Homo sapiens (human) ]

    Gene ID: 100190947, updated on 10-Oct-2023

    Summary

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    Official Symbol
    SUPT4H1P1provided by HGNC
    Official Full Name
    SPT4 homolog, DSIF elongation factor subunit pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:33981
    See related
    AllianceGenome:HGNC:33981
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SUPT4H1P
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    Genomic context

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    Location:
    2p12
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (75650309..75651648, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (75659599..75660938, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (75877435..75878774, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene small nucleolar RNA U13 Neighboring gene Sharpr-MPRA regulatory region 13771 Neighboring gene mitochondrial ribosomal protein L19 Neighboring gene uncharacterized LOC124906025 Neighboring gene GC-rich sequence DNA-binding factor 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11683 Neighboring gene uncharacterized LOC105374813 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:75938851-75939422 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:75951704-75952204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:75960925-75961425

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • SUPT4H1 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008701.2 

      Range
      101..1440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      75650309..75651648 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      75659599..75660938 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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