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Pbk PDZ binding kinase [ Rattus norvegicus (Norway rat) ]

Gene ID: 290326, updated on 10-Sep-2014
Official Symbol
Pbkprovided by RGD
Official Full Name
PDZ binding kinaseprovided by RGD
Primary source
RGD:1309565
See related
Ensembl:ENSRNOG00000015308
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
See Pbk in MapViewer
Location:
15p12
Exon count:
12
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (42489257..42500377)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 15 NC_005114.3 (49092278..49103401, complement)

Chromosome 15 - NC_005114.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102547503 Neighboring gene uncharacterized LOC102547734 Neighboring gene glioma tumor suppressor candidate region gene 2 protein-like Neighboring gene establishment of sister chromatid cohesion N-acetyltransferase 2 Neighboring gene coiled-coil domain containing 25

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein serine/threonine kinase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cellular response to UV ISO
Inferred from Sequence Orthology
more info
 
negative regulation of inflammatory response ISO
Inferred from Sequence Orthology
more info
 
negative regulation of proteasomal ubiquitin-dependent protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
negative regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of stress-activated MAPK cascade ISO
Inferred from Sequence Orthology
more info
 
protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
lymphokine-activated killer T-cell-originated protein kinase
Names
lymphokine-activated killer T-cell-originated protein kinase
NP_001073406.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079937.1NP_001073406.1  lymphokine-activated killer T-cell-originated protein kinase

    See proteins identical to NP_001073406.1

    Status: PROVISIONAL

    Source sequence(s)
    BC129099
    UniProtKB/TrEMBL
    A1L1J7
    Related
    ENSRNOP00000061382, ENSRNOT00000064306
    Conserved Domains (2) summary
    cd00180
    Location:38243
    PKc; Catalytic domain of Protein Kinases
    pfam00069
    Location:34316
    Pkinase; Protein kinase domain

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005114.4 

    Range
    42489257..42500377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006252103.2XP_006252165.1  

    See proteins identical to XP_006252165.1

    UniProtKB/TrEMBL
    A1L1J7
    Conserved Domains (2) summary
    cd00180
    Location:38243
    PKc; Catalytic domain of Protein Kinases
    pfam00069
    Location:34316
    Pkinase; Protein kinase domain
  2. XM_006252106.2XP_006252168.1  

    See proteins identical to XP_006252168.1

    UniProtKB/TrEMBL
    A1L1J7
    Conserved Domains (2) summary
    cd00180
    Location:38243
    PKc; Catalytic domain of Protein Kinases
    pfam00069
    Location:34316
    Pkinase; Protein kinase domain
  3. XM_006252102.1XP_006252164.1  

    Conserved Domains (2) summary
    cd00180
    Location:81286
    PKc; Catalytic domain of Protein Kinases
    pfam00069
    Location:77359
    Pkinase; Protein kinase domain
  4. XM_006252105.2XP_006252167.1  

    See proteins identical to XP_006252167.1

    UniProtKB/TrEMBL
    A1L1J7
    Conserved Domains (2) summary
    cd00180
    Location:38243
    PKc; Catalytic domain of Protein Kinases
    pfam00069
    Location:34316
    Pkinase; Protein kinase domain
  5. XM_006252104.2XP_006252166.1  

    See proteins identical to XP_006252166.1

    UniProtKB/TrEMBL
    A1L1J7
    Conserved Domains (2) summary
    cd00180
    Location:38243
    PKc; Catalytic domain of Protein Kinases
    pfam00069
    Location:34316
    Pkinase; Protein kinase domain

Alternate Rn_Celera

Genomic

  1. AC_000083.1 

    Range
    39695399..39706400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)