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scnn1a sodium channel, non-voltage-gated 1 alpha subunit [ Xenopus (Silurana) tropicalis (western clawed frog) ]

Gene ID: 395013, updated on 24-Jan-2015
Official Symbol
scnn1aprovided by Xenbase
Official Full Name
sodium channel, non-voltage-gated 1 alpha subunitprovided by Xenbase
Primary source
Xenbase:XB-GENE-996083
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Xenopus (Silurana) tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
besc2; enaca; scnea; scnn1; ENaCalpha; alpha-ENaC
Annotation information
Annotation category: partial on reference assembly
Orthologs
See scnn1a in MapViewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668240.1 (6968888..6995224, complement)

NW_004668240.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor receptor superfamily, member 1A Neighboring gene salivary glue protein Sgs-4-like Neighboring gene uncharacterized LOC100492685 Neighboring gene lymphotoxin beta receptor (TNFR superfamily, member 3)

Genomic Sequence:
NW_004668240 unplaced scaffold reference Xtropicalis_v7 Primary Assembly

Homology

Preferred Names
sodium channel, nonvoltage-gated 1 alpha
Names
sodium channel, nonvoltage-gated 1 alpha
sodium channel, nonvoltage-gated, type I, alpha

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001197195.1NP_001184124.1  sodium channel, nonvoltage-gated 1 alpha

    Status: VALIDATED

    Source sequence(s)
    BC064718
    UniProtKB/TrEMBL
    Q6P258
    Conserved Domains (2) summary
    TIGR00859
    Location:18602
    Amiloride-sensitive_sodium_channel_subunit_alpha; sodium channel transporter
    TIGR00867
    Location:26530
    Degenerin-like_protein_asic-2; degenerin

RefSeqs of Annotated Genomes: Xenopus (Silurana) tropicalis Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xtropicalis_v7 Primary Assembly

Genomic

  1. NW_004668240.1 

    Range
    6968888..6995224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)