U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Abhd15 abhydrolase domain containing 15 [ Mus musculus (house mouse) ]

    Gene ID: 67477, updated on 5-Mar-2024

    Summary

    Official Symbol
    Abhd15provided by MGI
    Official Full Name
    abhydrolase domain containing 15provided by MGI
    Primary source
    MGI:MGI:1914727
    See related
    Ensembl:ENSMUSG00000000686 AllianceGenome:MGI:1914727
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1300007F04Rik
    Summary
    Predicted to enable acylglycerol lipase activity and short-chain carboxylesterase activity. Predicted to be involved in cellular lipid metabolic process. Predicted to be located in extracellular region. Is expressed in brown fat; liver; testis; and white fat. Orthologous to human ABHD15 (abhydrolase domain containing 15). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in liver adult (RPKM 15.4), subcutaneous fat pad adult (RPKM 13.9) and 13 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    11 B5; 11 46.63 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (77405943..77411454)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (77515117..77520628)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_30056 Neighboring gene GIT ArfGAP 1 Neighboring gene transformation related protein 53 inducible protein 13 Neighboring gene predicted gene 10392 Neighboring gene TAO kinase 1 Neighboring gene eukaryotic translation initiation factor 2, subunit 1 alpha pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E8973 Neighboring gene ribosomal protein S2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables acylglycerol lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables short-chain carboxylesterase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in adipose tissue development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cellular lipid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in lipid catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein ABHD15
    Names
    abhydrolase domain-containing protein 15
    alpha/beta hydrolase domain-containing protein 15
    NP_080461.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026185.4NP_080461.3  protein ABHD15 precursor

      See identical proteins and their annotated locations for NP_080461.3

      Status: VALIDATED

      Source sequence(s)
      AK046590, AK153809, CJ304668
      Consensus CDS
      CCDS36234.1
      UniProtKB/Swiss-Prot
      Q3V371, Q5F2F2, Q8C9I5, Q8CF57, Q9CU23
      UniProtKB/TrEMBL
      B6DQM2
      Related
      ENSMUSP00000091541.5, ENSMUST00000094004.5
      Conserved Domains (2) summary
      PLN02511
      Location:26408
      PLN02511; hydrolase
      cl21494
      Location:85410
      Abhydrolase; alpha/beta hydrolases

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      77405943..77411454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)