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    CAALFM_C100160CA uncharacterized protein [ Candida albicans SC5314 ]

    Gene ID: 3639341, updated on 30-Nov-2023

    Summary

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    Gene symbol
    CAALFM_C100160CA
    Gene description
    uncharacterized protein
    Locus tag
    CAALFM_C100160CA
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_032089.1 (28286..29488, complement)

    Chromosome 1 - NC_032089.1Genomic Context describing neighboring genes Neighboring gene Kel1p Neighboring gene Rim8p Neighboring gene 2-isopropylmalate synthase Neighboring gene ribosomal 60S subunit protein L16A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032089.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Wor1 establishes opaque cell fate through inhibition of the general co-repressor Tup1 in Candida albicans. Alkafeef SS, et al. PLoS Genet, 2018 Jan. PMID 29337983, Free PMC Article
    2. A functional portrait of Med7 and the mediator complex in Candida albicans. Tebbji F, et al. PLoS Genet, 2014 Nov. PMID 25375174, Free PMC Article
    3. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
    4. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
    5. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_719050.1
    • Putative nucleolar protein with a predicted role in pre-rRNA processing and ribosome biogenesis; repressed by nitric oxide; required for flow model biofilm formation; Spider biofilm repressed

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_032089.1 Reference assembly

      Range
      28286..29488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_713957.1 → XP_719050.1  uncharacterized protein CAALFM_C100160CA [Candida albicans SC5314]

      See identical proteins and their annotated locations for XP_719050.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8H6C0Q2, Q5AB84
      Conserved Domains (2) summary
      cd12447
      Location:169 → 244
      RRM1_gar2; RNA recognition motif 1 (RRM1) found in yeast protein gar2 and similar proteins
      cl17169
      Location:272 → 344
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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