Tmem201 transmembrane protein 201 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tmem201provided by RGD
Official Full Name: transmembrane protein 201provided by RGD
Primary source: RGD:1583947
See related: Ensembl:ENSRNOG00000023152 AllianceGenome:RGD:1583947
Gene type: protein coding
RefSeq status: MODEL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable actin filament binding activity and lamin binding activity. Predicted to be involved in several processes, including centrosome localization; nuclear migration along microtubule; and protein localization to nuclear envelope. Predicted to act upstream of or within fibroblast migration and nuclear migration. Predicted to be located in nuclear envelope. Predicted to be integral component of nuclear inner membrane. Predicted to be active in nuclear membrane. Predicted to colocalize with cortical endoplasmic reticulum and spindle pole centrosome. Orthologous to human TMEM201 (transmembrane protein 201). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Heart (RPKM 37.1), Muscle (RPKM 28.6) and 9 other tissues See more
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	5	NC_086023.1 (165449270..165471901, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	5	NC_051340.1 (160166240..160188874, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	5	NC_005104.4 (166672700..166695288, complement)

Chromosome 5 - NC_086023.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables actin filament binding	IBA Inferred from Biological aspect of Ancestor more info
enables actin filament binding	ISO Inferred from Sequence Orthology more info
enables lamin binding	IBA Inferred from Biological aspect of Ancestor more info
enables lamin binding	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in centrosome localization	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within fibroblast migration	ISO Inferred from Sequence Orthology more info
involved_in nuclear envelope organization	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within nuclear migration	ISO Inferred from Sequence Orthology more info
involved_in nuclear migration along microtubule	IBA Inferred from Biological aspect of Ancestor more info
involved_in protein localization to nuclear envelope	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
located_in cortical endoplasmic reticulum	ISO Inferred from Sequence Orthology more info
located_in nuclear envelope	ISO Inferred from Sequence Orthology more info
located_in nuclear inner membrane	IEA Inferred from Electronic Annotation more info
located_in nuclear inner membrane	ISO Inferred from Sequence Orthology more info
is_active_in nuclear membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in nuclear membrane	ISO Inferred from Sequence Orthology more info
located_in spindle pole centrosome	ISO Inferred from Sequence Orthology more info