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    PGLYRP4 peptidoglycan recognition protein 4 [ Bos taurus (cattle) ]

    Gene ID: 616843, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PGLYRP4provided by VGNC
    Official Full Name
    peptidoglycan recognition protein 4provided by VGNC
    Primary source
    VGNC:VGNC:106862
    See related
    Ensembl:ENSBTAG00000054765
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (17123172..17144192)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132344836 Neighboring gene S100 calcium binding protein A9 Neighboring gene peptidoglycan recognition protein 3 Neighboring gene loricrin cornified envelope precursor protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N-acetylmuramoyl-L-alanine amidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidoglycan catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidoglycan recognition protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      17123172..17144192
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024989960.2 → XP_024845728.1  peptidoglycan recognition protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MPE3
      Conserved Domains (1) summary
      smart00701
      Location:212 → 352
      PGRP; Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme

    2. XM_024989961.2 → XP_024845729.1  peptidoglycan recognition protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MPE3
      Related
      ENSBTAP00000071526.2, ENSBTAT00000066655.2
      Conserved Domains (1) summary
      smart00701
      Location:212 → 352
      PGRP; Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme

    3. XM_024989962.2 → XP_024845730.1  peptidoglycan recognition protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MPE3
      Conserved Domains (1) summary
      smart00701
      Location:166 → 306
      PGRP; Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme
    Nucleotide Protein Strain
    Heading Accession and Version

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