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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051824.1 Reference ROS_Cfam_1.0
- Range
-
55513260..55545335 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038429019.1 → XP_038284947.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Related
- ENSCAFP00845019983.1, ENSCAFT00845025389.1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038429020.1 → XP_038284948.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Related
- ENSCAFP00845019992.1, ENSCAFT00845025399.1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038429016.1 → XP_038284944.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038429018.1 → XP_038284946.1 E3 ubiquitin-protein ligase UHRF1 isoform X3
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:279 → 325
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:680 → 725
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:379 → 546
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:95 → 246
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:4 → 33
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_038429017.1 → XP_038284945.1 E3 ubiquitin-protein ligase UHRF1 isoform X2
- UniProtKB/TrEMBL
- A0A8C0Q9F2, A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:299 → 345
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:700 → 745
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:399 → 566
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:115 → 266
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:31 → 53
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049280.1 Alternate UMICH_Zoey_3.1
- Range
-
54574546..54606612 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038504628.1 → XP_038360556.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038504629.1 → XP_038360557.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038504625.1 → XP_038360553.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038504627.1 → XP_038360555.1 E3 ubiquitin-protein ligase UHRF1 isoform X3
- Conserved Domains (5) summary
-
- cd15616
Location:279 → 325
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:680 → 725
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:379 → 546
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:95 → 246
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:4 → 33
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_038504626.1 → XP_038360554.1 E3 ubiquitin-protein ligase UHRF1 isoform X2
- Conserved Domains (5) summary
-
- cd15616
Location:299 → 345
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:700 → 745
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:399 → 566
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:115 → 266
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:31 → 53
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049761.1 Alternate UNSW_CanFamBas_1.0
- Range
-
55055222..55087332 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038631837.1 → XP_038487765.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038631838.1 → XP_038487766.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038631834.1 → XP_038487762.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038631836.1 → XP_038487764.1 E3 ubiquitin-protein ligase UHRF1 isoform X3
- Conserved Domains (5) summary
-
- cd15616
Location:279 → 325
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:680 → 725
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:379 → 546
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:95 → 246
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:4 → 33
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_038631835.1 → XP_038487763.1 E3 ubiquitin-protein ligase UHRF1 isoform X2
- Conserved Domains (5) summary
-
- cd15616
Location:299 → 345
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:700 → 745
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:399 → 566
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:115 → 266
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:31 → 53
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049241.1 Alternate UU_Cfam_GSD_1.0
- Range
-
55253102..55285205 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038567699.1 → XP_038423627.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038567700.1 → XP_038423628.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038567696.1 → XP_038423624.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038567698.1 → XP_038423626.1 E3 ubiquitin-protein ligase UHRF1 isoform X3
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:279 → 325
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:680 → 725
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:379 → 546
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:95 → 246
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:4 → 33
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_038567697.1 → XP_038423625.1 E3 ubiquitin-protein ligase UHRF1 isoform X2
- UniProtKB/TrEMBL
- A0A8C0Q9F2, A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:299 → 345
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:700 → 745
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:399 → 566
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:115 → 266
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:31 → 53
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
54583125..54615199 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038455149.1 → XP_038311077.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038455150.1 → XP_038311078.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_005633020.4 → XP_005633077.1 E3 ubiquitin-protein ligase UHRF1 isoform X1
See identical proteins and their annotated locations for XP_005633077.1
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:320 → 366
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:721 → 766
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- cd17122
Location:1 → 74
- Ubl_UHRF1; ubiquitin-like (Ubl) domain found in ubiquitin-like PHD and RING finger domain-containing protein 1(UHRF1)
- pfam02182
Location:420 → 587
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:136 → 287
- TTD; Tandem tudor domain within UHRF1
-
XM_038455148.1 → XP_038311076.1 E3 ubiquitin-protein ligase UHRF1 isoform X3
- UniProtKB/TrEMBL
- A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:279 → 325
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:680 → 725
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:379 → 546
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:95 → 246
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:4 → 33
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
-
XM_038455147.1 → XP_038311075.1 E3 ubiquitin-protein ligase UHRF1 isoform X2
- UniProtKB/TrEMBL
- A0A8C0Q9F2, A0A8I3NIT5, A0A8P0P1F9
- Conserved Domains (5) summary
-
- cd15616
Location:299 → 345
- PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
- cd16613
Location:700 → 745
- RING-HC_UHRF; RING finger, HC subclass, found in ubiquitin-like PHD and RING finger domain-containing proteins, UHRF1 and UHRF2, and similar proteins
- pfam02182
Location:399 → 566
- SAD_SRA; SAD/SRA domain
- pfam12148
Location:115 → 266
- TTD; Tandem tudor domain within UHRF1
- cl28922
Location:31 → 53
- Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold