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    KCNJ16 potassium inwardly rectifying channel subfamily J member 16 [ Canis lupus familiaris (dog) ]

    Gene ID: 611045, updated on 5-Mar-2024

    Summary

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    Official Symbol
    KCNJ16provided by VGNC
    Official Full Name
    potassium inwardly rectifying channel subfamily J member 16provided by VGNC
    Primary source
    VGNC:VGNC:42262
    See related
    Ensembl:ENSCAFG00845005421
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (18023819..18096162)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (17274785..17333030)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (10460571..10518835, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (16982418..17040164)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (10494745..10552754, complement)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097335 Neighboring gene uncharacterized LOC106559255 Neighboring gene uncharacterized LOC119873259 Neighboring gene SH3-containing GRB2-like protein 3-interacting protein 1 Neighboring gene uncharacterized LOC119873420 Neighboring gene potassium inwardly rectifying channel subfamily J member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A canine Arylsulfatase G (ARSG) mutation leading to a sulfatase deficiency is associated with neuronal ceroid lipofuscinosis. Abitbol M, et al. Proc Natl Acad Sci U S A, 2010 Aug 17. PMID 20679209, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inward rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inward rectifier potassium channel 16
    Names
    potassium voltage-gated channel subfamily J member 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001313870.2 → NP_001300799.1  inward rectifier potassium channel 16

      Status: PROVISIONAL

      Source sequence(s)
      JAAUVH010000313
      UniProtKB/TrEMBL
      A0A8C0L9I8, A0A8C0M1I9, E0WCW8
      Related
      ENSCAFP00845007541.1, ENSCAFT00845009650.1
      Conserved Domains (2) summary
      pfam01007
      Location:37 → 173
      IRK; Inward rectifier potassium channel
      pfam17655
      Location:182 → 349
      IRK_C; Inward rectifier potassium channel C-terminal domain

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      18023819..18096162
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038675101.1 → XP_038531029.1  inward rectifier potassium channel 16 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L9I8, A0A8C0M1I9, E0WCW8
      Conserved Domains (2) summary
      pfam01007
      Location:37 → 173
      IRK; Inward rectifier potassium channel
      pfam17655
      Location:182 → 349
      IRK_C; Inward rectifier potassium channel C-terminal domain

    2. XM_038675103.1 → XP_038531031.1  inward rectifier potassium channel 16 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L9I8, A0A8C0M1I9, E0WCW8
      Related
      ENSCAFP00845007548.1, ENSCAFT00845009658.1
      Conserved Domains (2) summary
      pfam01007
      Location:37 → 173
      IRK; Inward rectifier potassium channel
      pfam17655
      Location:182 → 349
      IRK_C; Inward rectifier potassium channel C-terminal domain

    3. XM_038675102.1 → XP_038531030.1  inward rectifier potassium channel 16 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L9I8, A0A8C0M1I9, E0WCW8
      Conserved Domains (2) summary
      pfam01007
      Location:37 → 173
      IRK; Inward rectifier potassium channel
      pfam17655
      Location:182 → 349
      IRK_C; Inward rectifier potassium channel C-terminal domain

    4. XM_038675104.1 → XP_038531032.1  inward rectifier potassium channel 16 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L9I8, A0A8C0M1I9, E0WCW8
      Related
      ENSCAFP00845007544.1, ENSCAFT00845009653.1
      Conserved Domains (2) summary
      pfam01007
      Location:37 → 173
      IRK; Inward rectifier potassium channel
      pfam17655
      Location:182 → 349
      IRK_C; Inward rectifier potassium channel C-terminal domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      16982418..17040164
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      10494745..10552754 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      10460571..10518835 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      17274785..17333030
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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