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    TOR1AIP1 torsin 1A interacting protein 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 610317, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TOR1AIP1provided by VGNC
    Official Full Name
    torsin 1A interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:58338
    See related
    Ensembl:ENSCAFG00845002082
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TOR1AIP1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (13179822..13228560)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (13031899..13080621)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (13322123..13370847)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (13091335..13140041)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (13197272..13245962)

    Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene torsin-1A-interacting protein 2 Neighboring gene uncharacterized LOC119872505 Neighboring gene SREBP regulating gene protein Neighboring gene centrosomal protein 350

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assembly of the β4-Integrin Interactome Based on Proximal Biotinylation in the Presence and Absence of Heterodimerization. Myllymäki SM, et al. Mol Cell Proteomics, 2019 Feb. PMID 30404858, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    torsin-1A-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051811.1 Reference ROS_Cfam_1.0

      Range
      13179822..13228560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038670999.1 → XP_038526927.1  torsin-1A-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0MCB5
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 576
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    2. XM_038670998.1 → XP_038526926.1  torsin-1A-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0MCB5, A0A8I3MF71, A0A8P0SHA8
      Related
      ENSCAFP00845002917.1, ENSCAFT00845003671.1
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 591
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    3. XM_038670997.1 → XP_038526925.1  torsin-1A-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0MCZ0, A0A8I3MK59, A0A8P0NRQ7
      Related
      ENSCAFP00845002901.1, ENSCAFT00845003649.1
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 591
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    4. XM_038670996.1 → XP_038526924.1  torsin-1A-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KQV1, A0A8C0Q521, A0A8I3MKN8, A0A8P0PHY0
      Related
      ENSCAFP00845002870.1, ENSCAFT00845003618.1
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 606
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049267.1 Alternate UMICH_Zoey_3.1

      Range
      13091335..13140041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038480816.1 → XP_038336744.1  torsin-1A-interacting protein 1 isoform X4

    2. XM_038480815.1 → XP_038336743.1  torsin-1A-interacting protein 1 isoform X3

    3. XM_038480814.1 → XP_038336742.1  torsin-1A-interacting protein 1 isoform X2

    4. XM_038480813.1 → XP_038336741.1  torsin-1A-interacting protein 1 isoform X1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

      Range
      13197272..13245962
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038606317.1 → XP_038462245.1  torsin-1A-interacting protein 1 isoform X4

    2. XM_038606316.1 → XP_038462244.1  torsin-1A-interacting protein 1 isoform X3

    3. XM_038606315.1 → XP_038462243.1  torsin-1A-interacting protein 1 isoform X2

    4. XM_038606314.1 → XP_038462242.1  torsin-1A-interacting protein 1 isoform X1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

      Range
      13322123..13370847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038542158.1 → XP_038398086.1  torsin-1A-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0MCB5
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 576
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    2. XM_038542157.1 → XP_038398085.1  torsin-1A-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0MCB5, A0A8I3MF71, A0A8P0SHA8
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 591
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    3. XM_038542156.1 → XP_038398084.1  torsin-1A-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0MCZ0, A0A8I3MK59, A0A8P0NRQ7
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 591
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    4. XM_038542155.1 → XP_038398083.1  torsin-1A-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KQV1, A0A8C0Q521, A0A8I3MKN8, A0A8P0PHY0
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 606
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      13031899..13080621
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038563222.1 → XP_038419150.1  torsin-1A-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0MCB5
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 576
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    2. XM_038563212.1 → XP_038419140.1  torsin-1A-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0MCB5, A0A8I3MF71, A0A8P0SHA8
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 591
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    3. XM_038563201.1 → XP_038419129.1  torsin-1A-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0MCZ0, A0A8I3MK59, A0A8P0NRQ7
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 591
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)

    4. XM_038563194.1 → XP_038419122.1  torsin-1A-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KQV1, A0A8C0Q521, A0A8I3MKN8, A0A8P0PHY0
      Conserved Domains (1) summary
      pfam05609
      Location:161 → 606
      LAP1C; Lamina-associated polypeptide 1C (LAP1C)
    Nucleotide Protein
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