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    CD99 CD99 molecule [ Canis lupus familiaris (dog) ]

    Gene ID: 609832, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CD99provided by VGNC
    Official Full Name
    CD99 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:54127
    See related
    Ensembl:ENSCAFG00845022471
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (1318887..1353410)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (1346278..1381038)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (1362108..1396897)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (1309594..1344332)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (1325654..1360395)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119868346 Neighboring gene uncharacterized LOC119868347 Neighboring gene Xg glycoprotein Neighboring gene glycogenin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in T cell extravasation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homotypic cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of neutrophil extravasation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CD99 antigen
    Names
    CD99 molecule (Xg blood group)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      1318887..1353410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038449282.1 → XP_038305210.1  CD99 antigen isoform X2

      UniProtKB/TrEMBL
      A0A8I3PPB6, A0A8P0TLS0
      Related
      ENSCAFP00845031080.1, ENSCAFT00845039673.1
      Conserved Domains (1) summary
      pfam12301
      Location:26 → 157
      CD99L2; CD99 antigen like protein 2

    2. XM_038449281.1 → XP_038305209.1  CD99 antigen isoform X1

      UniProtKB/TrEMBL
      A0A8C0JJJ6, A0A8C0YWM2, A0A8P0PNG8
      Conserved Domains (1) summary
      pfam12301
      Location:26 → 175
      CD99L2; CD99 antigen like protein 2

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      1309594..1344332
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038522717.1 → XP_038378645.1  CD99 antigen isoform X2

      Conserved Domains (1) summary
      pfam12301
      Location:26 → 157
      CD99L2; CD99 antigen like protein 2

    2. XM_038522714.1 → XP_038378642.1  CD99 antigen isoform X1

      Conserved Domains (1) summary
      pfam12301
      Location:26 → 175
      CD99L2; CD99 antigen like protein 2

    3. XM_038522716.1 → XP_038378644.1  CD99 antigen isoform X3

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      1325654..1360395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038651226.1 → XP_038507154.1  CD99 antigen isoform X2

      Conserved Domains (1) summary
      pfam12301
      Location:26 → 157
      CD99L2; CD99 antigen like protein 2

    2. XM_038651224.1 → XP_038507152.1  CD99 antigen isoform X1

      Conserved Domains (1) summary
      pfam12301
      Location:26 → 175
      CD99L2; CD99 antigen like protein 2

    3. XM_038651225.1 → XP_038507153.1  CD99 antigen isoform X4

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      1362108..1396897
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038586724.1 → XP_038442652.1  CD99 antigen isoform X2

      UniProtKB/TrEMBL
      A0A8I3PPB6, A0A8P0TLS0
      Conserved Domains (1) summary
      pfam12301
      Location:26 → 157
      CD99L2; CD99 antigen like protein 2

    2. XM_038586723.1 → XP_038442651.1  CD99 antigen isoform X1

      UniProtKB/TrEMBL
      A0A8C0JJJ6, A0A8C0YWM2, A0A8P0PNG8
      Conserved Domains (1) summary
      pfam12301
      Location:26 → 175
      CD99L2; CD99 antigen like protein 2

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      1346278..1381038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038464287.1 → XP_038320215.1  CD99 antigen isoform X2

      UniProtKB/TrEMBL
      A0A8I3PPB6, A0A8P0TLS0
      Conserved Domains (1) summary
      pfam12301
      Location:26 → 157
      CD99L2; CD99 antigen like protein 2

    2. XM_038464286.1 → XP_038320214.1  CD99 antigen isoform X1

      UniProtKB/TrEMBL
      A0A8C0JJJ6, A0A8C0YWM2, A0A8P0PNG8
      Conserved Domains (1) summary
      pfam12301
      Location:26 → 175
      CD99L2; CD99 antigen like protein 2
    Nucleotide Protein
    Heading Accession and Version

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