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    LETMD1 LETM1 domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 607861, updated on 5-Mar-2024

    Summary

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    Official Symbol
    LETMD1provided by VGNC
    Official Full Name
    LETM1 domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:42643
    See related
    Ensembl:ENSCAFG00845015645
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (3809305..3817581, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (42486087..42494364)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (42882837..42891111)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (3776041..3784312, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (3763396..3771684, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene transcription factor CP2 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene uncharacterized LOC106557897 Neighboring gene cysteine and serine rich nuclear protein 2 Neighboring gene solute carrier family 11 member 2 Neighboring gene HIG1 hypoxia inducible domain family member 1C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular monoatomic cation homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LETM1 domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      3809305..3817581 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438175.1 → XP_038294103.1  LETM1 domain-containing protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A8C0KQ24
      Conserved Domains (1) summary
      pfam07766
      Location:1 → 248
      LETM1; LETM1-like protein

    2. XM_038438176.1 → XP_038294104.1  LETM1 domain-containing protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A8P0NUN2
      Conserved Domains (1) summary
      pfam07766
      Location:86 → 312
      LETM1; LETM1-like protein

    3. XM_038438177.1 → XP_038294105.1  LETM1 domain-containing protein 1 isoform X9

      Conserved Domains (1) summary
      pfam07766
      Location:116 → 244
      LETM1; LETM1-like protein

    4. XM_038438172.1 → XP_038294100.1  LETM1 domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8C0TGB4, A0A8I3NUQ2
      Conserved Domains (1) summary
      pfam07766
      Location:79 → 337
      LETM1; LETM1-like protein

    5. XM_038438173.1 → XP_038294101.1  LETM1 domain-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8I3NUQ2
      Related
      ENSCAFP00845021995.1, ENSCAFT00845027942.1
      Conserved Domains (1) summary
      pfam07766
      Location:79 → 345
      LETM1; LETM1-like protein

    6. XM_038438171.1 → XP_038294099.1  LETM1 domain-containing protein 1 isoform X3

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 350
      LETM1; LETM1-like protein

    7. XM_038438168.1 → XP_038294096.1  LETM1 domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 384
      LETM1; LETM1-like protein

    8. XM_038438170.1 → XP_038294098.1  LETM1 domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 392
      LETM1; LETM1-like protein

    9. XM_038438174.1 → XP_038294102.1  LETM1 domain-containing protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8I3NUQ2
      Conserved Domains (1) summary
      pfam07766
      Location:59 → 317
      LETM1; LETM1-like protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      3776041..3784312 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512863.1 → XP_038368791.1  LETM1 domain-containing protein 1 isoform X7

      Conserved Domains (1) summary
      pfam07766
      Location:1 → 248
      LETM1; LETM1-like protein

    2. XM_038512864.1 → XP_038368792.1  LETM1 domain-containing protein 1 isoform X8

      Conserved Domains (1) summary
      pfam07766
      Location:86 → 312
      LETM1; LETM1-like protein

    3. XM_038512866.1 → XP_038368794.1  LETM1 domain-containing protein 1 isoform X9

      Conserved Domains (1) summary
      pfam07766
      Location:116 → 244
      LETM1; LETM1-like protein

    4. XM_038512860.1 → XP_038368788.1  LETM1 domain-containing protein 1 isoform X4

      Conserved Domains (1) summary
      pfam07766
      Location:79 → 337
      LETM1; LETM1-like protein

    5. XM_038512861.1 → XP_038368789.1  LETM1 domain-containing protein 1 isoform X5

      Conserved Domains (1) summary
      pfam07766
      Location:79 → 345
      LETM1; LETM1-like protein

    6. XM_038512859.1 → XP_038368787.1  LETM1 domain-containing protein 1 isoform X3

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 350
      LETM1; LETM1-like protein

    7. XM_038512857.1 → XP_038368785.1  LETM1 domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 384
      LETM1; LETM1-like protein

    8. XM_038512858.1 → XP_038368786.1  LETM1 domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 392
      LETM1; LETM1-like protein

    9. XM_038512862.1 → XP_038368790.1  LETM1 domain-containing protein 1 isoform X6

      Conserved Domains (1) summary
      pfam07766
      Location:59 → 317
      LETM1; LETM1-like protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      3763396..3771684 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640627.1 → XP_038496555.1  LETM1 domain-containing protein 1 isoform X7

    2. XM_038640628.1 → XP_038496556.1  LETM1 domain-containing protein 1 isoform X8

    3. XM_038640629.1 → XP_038496557.1  LETM1 domain-containing protein 1 isoform X9

    4. XM_038640624.1 → XP_038496552.1  LETM1 domain-containing protein 1 isoform X4

    5. XM_038640625.1 → XP_038496553.1  LETM1 domain-containing protein 1 isoform X5

    6. XM_038640623.1 → XP_038496551.1  LETM1 domain-containing protein 1 isoform X3

    7. XM_038640621.1 → XP_038496549.1  LETM1 domain-containing protein 1 isoform X1

    8. XM_038640622.1 → XP_038496550.1  LETM1 domain-containing protein 1 isoform X2

    9. XM_038640626.1 → XP_038496554.1  LETM1 domain-containing protein 1 isoform X6

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      42882837..42891111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577695.1 → XP_038433623.1  LETM1 domain-containing protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A8C0KQ24

    2. XM_038577696.1 → XP_038433624.1  LETM1 domain-containing protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A8P0NUN2

    3. XM_038577691.1 → XP_038433619.1  LETM1 domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0PFR8, A0A8C0TAE9, A0A8I3NUQ2

    4. XM_038577697.1 → XP_038433625.1  LETM1 domain-containing protein 1 isoform X9

    5. XM_038577693.1 → XP_038433621.1  LETM1 domain-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8I3NUQ2

    6. XM_038577690.1 → XP_038433618.1  LETM1 domain-containing protein 1 isoform X3

    7. XM_038577688.1 → XP_038433616.1  LETM1 domain-containing protein 1 isoform X1

    8. XM_038577689.1 → XP_038433617.1  LETM1 domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0PCS5

    9. XM_038577694.1 → XP_038433622.1  LETM1 domain-containing protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8I3NUQ2

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      42486087..42494364
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005636817.4 → XP_005636874.2  LETM1 domain-containing protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A8C0KQ24
      Conserved Domains (1) summary
      pfam07766
      Location:1 → 248
      LETM1; LETM1-like protein

    2. XM_022411161.2 → XP_022266869.2  LETM1 domain-containing protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A8P0NUN2
      Conserved Domains (1) summary
      pfam07766
      Location:86 → 312
      LETM1; LETM1-like protein

    3. XM_014108458.3 → XP_013963933.2  LETM1 domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8C0TGB4, A0A8I3NUQ2
      Conserved Domains (1) summary
      pfam07766
      Location:79 → 337
      LETM1; LETM1-like protein

    4. XM_022411162.2 → XP_022266870.1  LETM1 domain-containing protein 1 isoform X9

      Conserved Domains (1) summary
      pfam07766
      Location:116 → 244
      LETM1; LETM1-like protein

    5. XM_845192.6 → XP_850285.2  LETM1 domain-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8I3NUQ2
      Conserved Domains (1) summary
      pfam07766
      Location:79 → 345
      LETM1; LETM1-like protein

    6. XM_014108457.3 → XP_013963932.2  LETM1 domain-containing protein 1 isoform X3

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 350
      LETM1; LETM1-like protein

    7. XM_014108456.3 → XP_013963931.2  LETM1 domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 384
      LETM1; LETM1-like protein

    8. XM_005636816.4 → XP_005636873.2  LETM1 domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      pfam07766
      Location:126 → 392
      LETM1; LETM1-like protein

    9. XM_022411160.2 → XP_022266868.2  LETM1 domain-containing protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8C0TAE9, A0A8I3NUQ2
      Conserved Domains (1) summary
      pfam07766
      Location:59 → 317
      LETM1; LETM1-like protein
    Nucleotide Protein
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