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    HMGB2 high mobility group box 2 [ Bos taurus (cattle) ]

    Gene ID: 540444, updated on 13-Apr-2024

    Summary

    Gene symbol
    HMGB2
    Gene description
    high mobility group box 2
    See related
    BGD:BT29287; Ensembl:ENSBTAG00000015101
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (5735150..5737485, complement)

    Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112447765 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene uncharacterized LOC107132678 Neighboring gene uncharacterized LOC132345912 Neighboring gene Sin3A associated protein 30 Neighboring gene stimulator of chondrogenesis 1 Neighboring gene microRNA mir-2468

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC133870

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding, bending IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    high mobility group protein B2
    Names
    HMG-2
    high mobility group protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037616.1NP_001032705.1  high mobility group protein B2

      See identical proteins and their annotated locations for NP_001032705.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109755
      UniProtKB/Swiss-Prot
      P40673, Q32L56
      Related
      ENSBTAP00000020096.3, ENSBTAT00000020096.4
      Conserved Domains (2) summary
      pfam00505
      Location:95162
      HMG_box; HMG (high mobility group) box
      pfam09011
      Location:678
      HMG_box_2; HMG-box domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      5735150..5737485 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)