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    NELFE negative elongation factor complex member E [ Bos taurus (cattle) ]

    Gene ID: 540158, updated on 5-Mar-2024

    Summary

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    Official Symbol
    NELFEprovided by VGNC
    Official Full Name
    negative elongation factor complex member Eprovided by VGNC
    Primary source
    VGNC:VGNC:32002
    See related
    BGD:BT10677; Ensembl:ENSBTAG00000007453
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    RDBP
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 23
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (27409462..27415204)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 19 Neighboring gene decapping exoribonuclease Neighboring gene SKI2 subunit of superkiller complex Neighboring gene complement factor B Neighboring gene complement C2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC140563

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NELF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    negative elongation factor E
    Names
    NELF-E
    RD RNA binding protein
    RNA-binding protein RD

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076204.2 → NP_001069672.1  negative elongation factor E

      See identical proteins and their annotated locations for NP_001069672.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120072
      UniProtKB/Swiss-Prot
      Q0V898
      UniProtKB/TrEMBL
      A0A3Q1MCR4
      Related
      ENSBTAP00000009802.5, ENSBTAT00000009802.6
      Conserved Domains (1) summary
      cd12305
      Location:252 → 326
      RRM_NELFE; RNA recognition motif in negative elongation factor E (NELF-E) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      27409462..27415204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0V898.1 GenPept UniProtKB/Swiss-Prot:Q0V898

    Gene LinkOut

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