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    SINHCAF SIN3-HDAC complex associated factor [ Bos taurus (cattle) ]

    Gene ID: 538649, updated on 5-Mar-2024

    Summary

    Official Symbol
    SINHCAFprovided by VGNC
    Official Full Name
    SIN3-HDAC complex associated factorprovided by VGNC
    Primary source
    VGNC:VGNC:34626
    See related
    BGD:BT24053; Ensembl:ENSBTAG00000001161
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FAM60A
    Orthologs
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (78658640..78688174)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 5B Neighboring gene uncharacterized LOC132345323 Neighboring gene uncharacterized LOC112446729 Neighboring gene large ribosomal subunit protein eL38-like Neighboring gene caprin family member 2

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    General protein information

    Preferred Names
    SIN3-HDAC complex-associated factor
    Names
    family with sequence similarity 60 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076116.1NP_001069584.1  SIN3-HDAC complex-associated factor

      See identical proteins and their annotated locations for NP_001069584.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119933
      UniProtKB/TrEMBL
      Q0VCY5
      Related
      ENSBTAP00000001545.4, ENSBTAT00000001545.5
      Conserved Domains (1) summary
      pfam15396
      Location:2198
      FAM60A; Protein Family FAM60A

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      78658640..78688174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886598.1XP_059742581.1  SIN3-HDAC complex-associated factor isoform X2

      UniProtKB/TrEMBL
      Q0VCY5
    2. XM_005206844.5XP_005206901.3  SIN3-HDAC complex-associated factor isoform X1

      Related
      ENSBTAP00000094535.1, ENSBTAT00000117926.1