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    PDZD4 PDZ domain containing 4 [ Bos taurus (cattle) ]

    Gene ID: 538475, updated on 5-Mar-2024

    Summary

    Official Symbol
    PDZD4provided by VGNC
    Official Full Name
    PDZ domain containing 4provided by VGNC
    Primary source
    VGNC:VGNC:32727
    See related
    BGD:BT16050; Ensembl:ENSBTAG00000021422
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (37018129..37045966, complement)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma Neighboring gene signal sequence receptor subunit 4 Neighboring gene large ribosomal subunit protein eL21-like Neighboring gene L1 cell adhesion molecule

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    General protein information

    Preferred Names
    PDZ domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205543.1NP_001192472.1  PDZ domain-containing protein 4

      See identical proteins and their annotated locations for NP_001192472.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000030
      Related
      ENSBTAP00000088279.1, ENSBTAT00000126318.1
      Conserved Domains (1) summary
      smart00228
      Location:138214
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37018129..37045966 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010821566.4XP_010819868.1  PDZ domain-containing protein 4 isoform X2

      Conserved Domains (1) summary
      smart00228
      Location:144220
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    2. XM_005227693.5XP_005227750.1  PDZ domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      F1MWQ6
      Related
      ENSBTAP00000028557.6, ENSBTAT00000028557.7
      Conserved Domains (1) summary
      smart00228
      Location:144220
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    3. XM_005227694.5XP_005227751.1  PDZ domain-containing protein 4 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MBE7
      Related
      ENSBTAP00000071403.1, ENSBTAT00000085132.2
      Conserved Domains (1) summary
      cd00992
      Location:19103
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...