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    STX2 syntaxin 2 [ Bos taurus (cattle) ]

    Gene ID: 519148, updated on 5-Mar-2024

    Summary

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    Official Symbol
    STX2provided by VGNC
    Official Full Name
    syntaxin 2provided by VGNC
    Primary source
    VGNC:VGNC:35438
    See related
    BGD:BT15148; Ensembl:ENSBTAG00000007988
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (46316718..46383190)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor D1 Neighboring gene translation machinery-associated protein 7-like Neighboring gene RAN, member RAS oncogene family Neighboring gene RIMS binding protein 2 Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene piwi like RNA-mediated gene silencing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic active zone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    syntaxin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      46316718..46383190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010813868.4 → XP_010812170.1  syntaxin-2 isoform X1

      See identical proteins and their annotated locations for XP_010812170.1

      UniProtKB/TrEMBL
      F1MNQ8
      Related
      ENSBTAP00000053418.3, ENSBTAT00000061491.4
      Conserved Domains (3) summary
      cd00179
      Location:29 → 180
      SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
      cd15882
      Location:190 → 258
      SNARE_syntaxin2; SNARE motif of syntaxin 2
      pfam00804
      Location:29 → 226
      Syntaxin; Syntaxin

    2. XM_015475452.3 → XP_015330938.1  syntaxin-2 isoform X4

      Related
      ENSBTAP00000102225.1, ENSBTAT00000090643.1
      Conserved Domains (3) summary
      cd00179
      Location:29 → 180
      SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
      cd15848
      Location:190 → 227
      SNARE_syntaxin1-like; SNARE motif of syntaxin 1 and related proteins
      pfam00804
      Location:29 → 225
      Syntaxin; Syntaxin

    3. XM_003587140.5 → XP_003587188.1  syntaxin-2 isoform X3

      See identical proteins and their annotated locations for XP_003587188.1

      UniProtKB/TrEMBL
      A0A3Q1MPD9
      Related
      ENSBTAP00000071521.2, ENSBTAT00000071217.2
      Conserved Domains (3) summary
      cd00179
      Location:29 → 180
      SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
      cd15882
      Location:190 → 258
      SNARE_syntaxin2; SNARE motif of syntaxin 2
      pfam00804
      Location:29 → 226
      Syntaxin; Syntaxin

    4. XM_059876308.1 → XP_059732291.1  syntaxin-2 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1NEX5
      Related
      ENSBTAP00000070236.2, ENSBTAT00000080949.2

    5. XM_003587141.5 → XP_003587189.2  syntaxin-2 isoform X5

      See identical proteins and their annotated locations for XP_003587189.2

      Conserved Domains (3) summary
      cd00179
      Location:29 → 180
      SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
      cd15848
      Location:190 → 225
      SNARE_syntaxin1-like; SNARE motif of syntaxin 1 and related proteins
      pfam00804
      Location:29 → 225
      Syntaxin; Syntaxin
    Nucleotide Protein Strain
    Heading Accession and Version

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