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    DCHS1 dachsous cadherin-related 1 [ Bos taurus (cattle) ]

    Gene ID: 515576, updated on 5-Mar-2024

    Summary

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    Official Symbol
    DCHS1provided by VGNC
    Official Full Name
    dachsous cadherin-related 1provided by VGNC
    Primary source
    VGNC:VGNC:27913
    See related
    Ensembl:ENSBTAG00000015405
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 15
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (46407427..46444145)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene interferon-induced very large GTPase 1-like Neighboring gene mitochondrial ribosomal protein L17 Neighboring gene tripeptidyl peptidase 1 Neighboring gene TATA-box binding protein associated factor 10 Neighboring gene integrin linked kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protocadherin-16
    Names
    dachsous 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      46407427..46444145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002693149.6 → XP_002693195.2  protocadherin-16

      UniProtKB/TrEMBL
      E1B969
      Related
      ENSBTAP00000020475.4, ENSBTAT00000020475.5
      Conserved Domains (1) summary
      cd11304
      Location:1112 → 1205
      Cadherin_repeat; Cadherin tandem repeat domain
    Nucleotide Protein Strain
    Heading Accession and Version

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