U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PIGH phosphatidylinositol glycan anchor biosynthesis class H [ Bos taurus (cattle) ]

    Gene ID: 515306, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PIGHprovided by VGNC
    Official Full Name
    phosphatidylinositol glycan anchor biosynthesis class Hprovided by VGNC
    Primary source
    VGNC:VGNC:32869
    See related
    BGD:BT20880; Ensembl:ENSBTAG00000018299
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    PIG-H
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 10
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (79466239..79474711, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 229B Neighboring gene pleckstrin homology, MyTH4 and FERM domain containing H1 Neighboring gene uncharacterized LOC132346403 Neighboring gene large ribosomal subunit protein eL39

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC134190

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    phosphatidylinositol N-acetylglucosaminyltransferase subunit H
    Names
    phosphatidylinositol-glycan biosynthesis class H protein
    NP_001033205.2
    XP_015328717.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038116.2 → NP_001033205.2  phosphatidylinositol N-acetylglucosaminyltransferase subunit H

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the supported protein.
      Source sequence(s)
      BC109701, DN280781, EV608727
      UniProtKB/Swiss-Prot
      Q32L89
      UniProtKB/TrEMBL
      F1MGP1
      Related
      ENSBTAP00000024352.3, ENSBTAT00000024352.4
      Conserved Domains (1) summary
      pfam10181
      Location:99 → 168
      PIG-H; GPI-GlcNAc transferase complex, PIG-H component

    RNA

    1. NR_045138.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      BC109701, DN280781, EH137403, EV608727

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      79466239..79474711 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015473231.2 → XP_015328717.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform X1

      UniProtKB/Swiss-Prot
      Q32L89
      Conserved Domains (1) summary
      pfam10181
      Location:99 → 167
      PIG-H; GPI-GlcNAc transferase complex, PIG-H component
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32L89.1 GenPept UniProtKB/Swiss-Prot:Q32L89

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.