U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LRRC57 leucine rich repeat containing 57 [ Bos taurus (cattle) ]

    Gene ID: 508699, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LRRC57provided by VGNC
    Official Full Name
    leucine rich repeat containing 57provided by VGNC
    Primary source
    VGNC:VGNC:55121
    See related
    BGD:BT24068; Ensembl:ENSBTAG00000031981
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (37869707..37875101, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 106 Neighboring gene synaptosome associated protein 23 Neighboring gene HAUS augmin like complex subunit 2 Neighboring gene StAR related lipid transfer domain containing 9 Neighboring gene codanin 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • FLJ36812, MGC140628

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    leucine-rich repeat-containing protein 57

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031754.3 → NP_001026924.2  leucine-rich repeat-containing protein 57

      See identical proteins and their annotated locations for NP_001026924.2

      Status: VALIDATED

      Source sequence(s)
      BC118442
      UniProtKB/TrEMBL
      F6Q0Z5, Q17QC1
      Related
      ENSBTAP00000042745.3, ENSBTAT00000045347.3
      Conserved Domains (2) summary
      COG4886
      Location:20 → 169
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:40 → 63
      LRR_RI; leucine-rich repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37869707..37875101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059890296.1 → XP_059746279.1  leucine-rich repeat-containing protein 57 isoform X1

      UniProtKB/TrEMBL
      F6Q0Z5, Q17QC1

    2. XM_005211560.5 → XP_005211617.1  leucine-rich repeat-containing protein 57 isoform X1

      See identical proteins and their annotated locations for XP_005211617.1

      UniProtKB/TrEMBL
      F6Q0Z5, Q17QC1
      Conserved Domains (2) summary
      COG4886
      Location:20 → 169
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:40 → 63
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.