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    KRTCAP3 keratinocyte associated protein 3 [ Bos taurus (cattle) ]

    Gene ID: 508550, updated on 5-Mar-2024

    Summary

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    Official Symbol
    KRTCAP3provided by VGNC
    Official Full Name
    keratinocyte associated protein 3provided by VGNC
    Primary source
    VGNC:VGNC:30752
    See related
    BGD:BT29189; Ensembl:ENSBTAG00000018156
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (72232725..72234382, complement)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 4 Neighboring gene intraflagellar transport 172 Neighboring gene nuclear receptor binding protein 1 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1G

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC128201

    General protein information

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    Preferred Names
    keratinocyte-associated protein 3
    Names
    KCP-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035062.2 → NP_001030234.1  keratinocyte-associated protein 3

      See identical proteins and their annotated locations for NP_001030234.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103079
      UniProtKB/Swiss-Prot
      Q3SZ72
      UniProtKB/TrEMBL
      F1MEG5
      Related
      ENSBTAP00000024162.3, ENSBTAT00000024162.4
      Conserved Domains (1) summary
      pfam12304
      Location:19 → 200
      BCLP; Beta-casein like protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      72232725..72234382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010810196.4 → XP_010808498.1  keratinocyte-associated protein 3 isoform X1

      See identical proteins and their annotated locations for XP_010808498.1

      UniProtKB/TrEMBL
      A0A3Q1LL66, A0A3Q1LXT6
      Related
      ENSBTAP00000057514.1, ENSBTAT00000071676.2
      Conserved Domains (1) summary
      pfam12304
      Location:63 → 244
      BCLP; Beta-casein like protein

    2. XM_010810197.4 → XP_010808499.1  keratinocyte-associated protein 3 isoform X1

      See identical proteins and their annotated locations for XP_010808499.1

      UniProtKB/TrEMBL
      A0A3Q1LL66, A0A3Q1LXT6
      Conserved Domains (1) summary
      pfam12304
      Location:63 → 244
      BCLP; Beta-casein like protein
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SZ72.1 GenPept UniProtKB/Swiss-Prot:Q3SZ72

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