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    LRRC3 leucine rich repeat containing 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 487800, updated on 5-Mar-2024

    Summary

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    Official Symbol
    LRRC3provided by VGNC
    Official Full Name
    leucine rich repeat containing 3provided by VGNC
    Primary source
    VGNC:VGNC:53033
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 31
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 31 NC_051835.1 (37808251..37812002)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 31 NC_006613.4 (37420414..37424165)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 31 NC_049252.1 (38155114..38158865)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 31 NC_049291.1 (37679257..37683008)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 31 NC_049772.1 (37657734..37661485)

    Chromosome 31 - NC_051835.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 410 Neighboring gene transient receptor potential cation channel subfamily M member 2 Neighboring gene thrombospondin type laminin G domain and EAR repeats Neighboring gene keratin-associated protein 10-7-like Neighboring gene keratin-associated protein 10-12-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051835.1 Reference ROS_Cfam_1.0

      Range
      37808251..37812002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038443152.1 → XP_038299080.1  leucine-rich repeat-containing protein 3

      UniProtKB/TrEMBL
      A0A8C0R408
      Conserved Domains (3) summary
      smart00013
      Location:94 → 130
      LRRNT; Leucine rich repeat N-terminal domain
      sd00031
      Location:110 → 130
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:131 → 187
      LRR_8; Leucine rich repeat

    RNA

    1. XR_005305170.1 RNA Sequence

    2. XR_005305169.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049291.1 Alternate UMICH_Zoey_3.1

      Range
      37679257..37683008
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038518062.1 → XP_038373990.1  leucine-rich repeat-containing protein 3

      Conserved Domains (3) summary
      smart00013
      Location:94 → 130
      LRRNT; Leucine rich repeat N-terminal domain
      sd00031
      Location:110 → 130
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:131 → 187
      LRR_8; Leucine rich repeat

    RNA

    1. XR_005348622.1 RNA Sequence

    2. XR_005348621.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049772.1 Alternate UNSW_CanFamBas_1.0

      Range
      37657734..37661485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038646027.1 → XP_038501955.1  leucine-rich repeat-containing protein 3

      Conserved Domains (3) summary
      smart00013
      Location:94 → 130
      LRRNT; Leucine rich repeat N-terminal domain
      sd00031
      Location:110 → 130
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:131 → 187
      LRR_8; Leucine rich repeat

    2. XM_038646026.1 → XP_038501954.1  leucine-rich repeat-containing protein 3

      Conserved Domains (3) summary
      smart00013
      Location:94 → 130
      LRRNT; Leucine rich repeat N-terminal domain
      sd00031
      Location:110 → 130
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:131 → 187
      LRR_8; Leucine rich repeat

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049252.1 Alternate UU_Cfam_GSD_1.0

      Range
      38155114..38158865
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038581625.1 → XP_038437553.1  leucine-rich repeat-containing protein 3

      UniProtKB/TrEMBL
      A0A8C0R408
      Conserved Domains (3) summary
      smart00013
      Location:94 → 130
      LRRNT; Leucine rich repeat N-terminal domain
      sd00031
      Location:110 → 130
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:131 → 187
      LRR_8; Leucine rich repeat

    RNA

    1. XR_005382465.1 RNA Sequence

    2. XR_005382464.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006613.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      37420414..37424165
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038461907.1 → XP_038317835.1  leucine-rich repeat-containing protein 3

      UniProtKB/TrEMBL
      A0A8C0R408
      Conserved Domains (3) summary
      smart00013
      Location:94 → 130
      LRRNT; Leucine rich repeat N-terminal domain
      sd00031
      Location:110 → 130
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:131 → 187
      LRR_8; Leucine rich repeat

    RNA

    1. XR_005316814.1 RNA Sequence

    2. XR_005316813.1 RNA Sequence

    Nucleotide Protein
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