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    AMIGO2 adhesion molecule with Ig like domain 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 486594, updated on 5-Mar-2024

    Summary

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    Official Symbol
    AMIGO2provided by VGNC
    Official Full Name
    adhesion molecule with Ig like domain 2provided by VGNC
    Primary source
    VGNC:VGNC:37832
    See related
    Ensembl:ENSCAFG00845026869
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (7573450..7576716)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (38798999..38802268, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (39041956..39045226, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (7509723..7513046)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (7552000..7555266)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111092745 Neighboring gene uncharacterized LOC111092814 Neighboring gene uncharacterized LOC119866388 Neighboring gene U1 small nuclear ribonucleoprotein C-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amphoterin-induced protein 2; LOW QUALITY PROTEIN: amphoterin-induced protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      7573450..7576716
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438379.1 → XP_038294307.1  amphoterin-induced protein 2

      UniProtKB/TrEMBL
      A0A8C0PE54, A0A8I3PT50
      Related
      ENSCAFP00845037155.1, ENSCAFT00845047350.1
      Conserved Domains (4) summary
      smart00409
      Location:297 → 379
      IG; Immunoglobulin
      COG4886
      Location:53 → 239
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:50 → 71
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:93 → 174
      LRR_8; Leucine rich repeat

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      7509723..7513046
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038513087.1 → XP_038369015.1  LOW QUALITY PROTEIN: amphoterin-induced protein 2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      7552000..7555266
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640849.1 → XP_038496777.1  amphoterin-induced protein 2

      Conserved Domains (4) summary
      smart00409
      Location:297 → 379
      IG; Immunoglobulin
      COG4886
      Location:53 → 239
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:50 → 71
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:93 → 174
      LRR_8; Leucine rich repeat

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      39041956..39045226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577441.1 → XP_038433369.1  amphoterin-induced protein 2

      UniProtKB/TrEMBL
      A0A8C0PE54, A0A8I3PT50
      Conserved Domains (4) summary
      smart00409
      Location:297 → 379
      IG; Immunoglobulin
      COG4886
      Location:53 → 239
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:50 → 71
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:93 → 174
      LRR_8; Leucine rich repeat

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      38798999..38802268 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038460022.1 → XP_038315950.1  amphoterin-induced protein 2

      UniProtKB/TrEMBL
      A0A8C0PE54, A0A8I3PT50
      Conserved Domains (4) summary
      smart00409
      Location:297 → 379
      IG; Immunoglobulin
      COG4886
      Location:53 → 239
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:50 → 71
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:93 → 174
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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