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    OSTF1 osteoclast stimulating factor 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 484161, updated on 5-Mar-2024

    Summary

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    Official Symbol
    OSTF1provided by VGNC
    Official Full Name
    osteoclast stimulating factor 1provided by VGNC
    Primary source
    VGNC:VGNC:44171
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See OSTF1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (83501258..83590355, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (83549739..83604787, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (83733999..83820855, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (83287322..83342314, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (83005397..83060459, complement)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 5 Neighboring gene uncharacterized LOC111096657 Neighboring gene uncharacterized LOC102151731 Neighboring gene uncharacterized LOC119870833 Neighboring gene small nucleolar RNA SNORA12 Neighboring gene uncharacterized LOC111096668 Neighboring gene nicotinamide riboside kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    osteoclast-stimulating factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      83501258..83590355 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038655181.1 → XP_038511109.1  osteoclast-stimulating factor 1 isoform X1

      Conserved Domains (3) summary
      cd11772
      Location:16 → 92
      SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
      sd00045
      Location:100 → 127
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:101 → 194
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      83287322..83342314 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038466374.1 → XP_038322302.1  osteoclast-stimulating factor 1 isoform X2

      Conserved Domains (3) summary
      cd11772
      Location:16 → 92
      SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
      sd00045
      Location:100 → 127
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:101 → 194
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      83005397..83060459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038591373.1 → XP_038447301.1  osteoclast-stimulating factor 1 isoform X3

      Conserved Domains (3) summary
      cd11772
      Location:16 → 92
      SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
      sd00045
      Location:100 → 127
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:101 → 194
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      83733999..83820855 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038527069.1 → XP_038382997.1  osteoclast-stimulating factor 1 isoform X4

      Conserved Domains (3) summary
      cd11772
      Location:16 → 92
      SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
      sd00045
      Location:100 → 127
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:101 → 194
      Ank_2; Ankyrin repeats (3 copies)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      83549739..83604787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038583235.1 → XP_038439163.1  osteoclast-stimulating factor 1 isoform X5

      Conserved Domains (3) summary
      cd11772
      Location:16 → 92
      SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
      sd00045
      Location:100 → 127
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:101 → 194
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
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