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    REST RE1 silencing transcription factor [ Canis lupus familiaris (dog) ]

    Gene ID: 482163, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RESTprovided by VGNC
    Official Full Name
    RE1 silencing transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:45480
    See related
    Ensembl:ENSCAFG00845013968
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See REST in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (49654746..49677219)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (48930954..48953349)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (49801275..49823781)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (49327159..49349567)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (48856606..48878993)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098472 Neighboring gene U5 spliceosomal RNA Neighboring gene nitric oxide associated 1 Neighboring gene RNA polymerase II subunit B Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RE1-silencing transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      49654746..49677219
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038685736.1 → XP_038541664.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038685734.1 → XP_038541662.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_038685733.1 → XP_038541661.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Related
      ENSCAFP00845019641.1, ENSCAFT00845024970.1
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    4. XM_038685735.1 → XP_038541663.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      49327159..49349567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038493880.1 → XP_038349808.1  RE1-silencing transcription factor

      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038493878.1 → XP_038349806.1  RE1-silencing transcription factor

      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_038493877.1 → XP_038349805.1  RE1-silencing transcription factor

      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    4. XM_038493879.1 → XP_038349807.1  RE1-silencing transcription factor

      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      48856606..48878993
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620118.1 → XP_038476046.1  RE1-silencing transcription factor

    2. XM_038620116.1 → XP_038476044.1  RE1-silencing transcription factor

    3. XM_038620115.1 → XP_038476043.1  RE1-silencing transcription factor

    4. XM_038620117.1 → XP_038476045.1  RE1-silencing transcription factor

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      49801275..49823781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556183.1 → XP_038412111.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038556185.1 → XP_038412113.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_038556184.1 → XP_038412112.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    4. XM_038556186.1 → XP_038412114.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48930954..48953349
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038425970.1 → XP_038281898.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038425956.1 → XP_038281884.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_539282.6 → XP_539282.3  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain

    4. XM_038425962.1 → XP_038281890.1  RE1-silencing transcription factor

      UniProtKB/TrEMBL
      A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
      Conserved Domains (6) summary
      PHA03247
      Location:602 → 711
      PHA03247; large tegument protein UL36; Provisional
      PHA03369
      Location:594 → 817
      PHA03369; capsid maturational protease; Provisional
      sd00017
      Location:277 → 297
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam03154
      Location:471 → 707
      Atrophin-1; Atrophin-1 family
      pfam13465
      Location:317 → 342
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:303 → 327
      zf-H2C2_5; C2H2-type zinc-finger domain
    Nucleotide Protein
    Heading Accession and Version

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