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    SUSD1 sushi domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 481667, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SUSD1provided by VGNC
    Official Full Name
    sushi domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:46997
    See related
    Ensembl:ENSCAFG00845005810
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SUSD1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (67705654..67832827, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (64980687..65107497, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (66984906..67115079, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (66220502..66347159, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (66243789..66371033, complement)

    Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119873978 Neighboring gene uncharacterized LOC111097883 Neighboring gene uncharacterized LOC111097884 Neighboring gene uncharacterized LOC119873979 Neighboring gene polypyrimidine tract binding protein 3 Neighboring gene 60S ribosomal protein L29-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sushi domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051815.1 Reference ROS_Cfam_1.0

      Range
      67705654..67832827 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038682635.1 → XP_038538563.1  sushi domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0SR83
      Related
      ENSCAFP00845008177.1, ENSCAFT00845010514.1
      Conserved Domains (4) summary
      cd00033
      Location:238 → 293
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00179
      Location:124 → 155
      EGF_CA; Calcium-binding EGF-like domain
      PHA02927
      Location:100 → 293
      PHA02927; secreted complement-binding protein; Provisional
      pfam12947
      Location:41 → 68
      EGF_3; EGF domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049271.1 Alternate UMICH_Zoey_3.1

      Range
      66220502..66347159 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038491217.1 → XP_038347145.1  sushi domain-containing protein 1

      Conserved Domains (4) summary
      cd00033
      Location:238 → 293
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00179
      Location:124 → 155
      EGF_CA; Calcium-binding EGF-like domain
      PHA02927
      Location:100 → 293
      PHA02927; secreted complement-binding protein; Provisional
      pfam12947
      Location:41 → 68
      EGF_3; EGF domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

      Range
      66243789..66371033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038617188.1 → XP_038473116.1  sushi domain-containing protein 1

      Conserved Domains (4) summary
      cd00033
      Location:238 → 293
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00179
      Location:124 → 155
      EGF_CA; Calcium-binding EGF-like domain
      PHA02927
      Location:100 → 293
      PHA02927; secreted complement-binding protein; Provisional
      pfam12947
      Location:41 → 68
      EGF_3; EGF domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

      Range
      66984906..67115079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038553300.1 → XP_038409228.1  sushi domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0SR83
      Conserved Domains (4) summary
      cd00033
      Location:238 → 293
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00179
      Location:124 → 155
      EGF_CA; Calcium-binding EGF-like domain
      PHA02927
      Location:100 → 293
      PHA02927; secreted complement-binding protein; Provisional
      pfam12947
      Location:41 → 68
      EGF_3; EGF domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      64980687..65107497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038668422.1 → XP_038524350.1  sushi domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0SR83
      Conserved Domains (4) summary
      cd00033
      Location:238 → 293
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00179
      Location:124 → 155
      EGF_CA; Calcium-binding EGF-like domain
      PHA02927
      Location:100 → 293
      PHA02927; secreted complement-binding protein; Provisional
      pfam12947
      Location:41 → 68
      EGF_3; EGF domain
    Nucleotide Protein
    Heading Accession and Version

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