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    TRMU tRNA mitochondrial 2-thiouridylase [ Canis lupus familiaris (dog) ]

    Gene ID: 481204, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TRMUprovided by VGNC
    Official Full Name
    tRNA mitochondrial 2-thiouridylaseprovided by VGNC
    Primary source
    VGNC:VGNC:47861
    See related
    Ensembl:ENSCAFG00845009937
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (20575454..20593140, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (19764367..19782082, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (20790582..20808285, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (20296080..20313753, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (20608580..20626275, complement)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097616 Neighboring gene cadherin EGF LAG seven-pass G-type receptor 1 Neighboring gene uncharacterized LOC119880895 Neighboring gene G2 and S-phase expressed 1 Neighboring gene tetratricopeptide repeat domain 38

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sulfurtransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble position uridine thiolation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial tRNA-specific 2-thiouridylase 1
    Names
    tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
    XP_013972754.1
    XP_022279993.1
    XP_038344229.1
    XP_038344230.1
    XP_038344231.1
    XP_038406134.1
    XP_038406135.1
    XP_038406136.1
    XP_038470122.1
    XP_038470123.1
    XP_038470124.1
    XP_038535467.1
    XP_038535468.1
    XP_038535469.1
    XP_538325.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      20575454..20593140 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038679539.1 → XP_038535467.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KA63, A0A8C0MJX4, A0A8C0QQ09, A0A8I3N2T0
      Related
      ENSCAFP00845013603.1, ENSCAFT00845017478.1
      Conserved Domains (1) summary
      pfam03054
      Location:5 → 383
      tRNA_Me_trans; tRNA methyl transferase

    2. XM_038679540.1 → XP_038535468.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    3. XM_038679541.1 → XP_038535469.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      20296080..20313753 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038488301.1 → XP_038344229.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1

      Conserved Domains (1) summary
      pfam03054
      Location:5 → 383
      tRNA_Me_trans; tRNA methyl transferase

    2. XM_038488302.1 → XP_038344230.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    3. XM_038488303.1 → XP_038344231.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      20608580..20626275 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038614194.1 → XP_038470122.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1

      Conserved Domains (1) summary
      pfam03054
      Location:5 → 383
      tRNA_Me_trans; tRNA methyl transferase

    2. XM_038614195.1 → XP_038470123.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    3. XM_038614196.1 → XP_038470124.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      20790582..20808285 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038550206.1 → XP_038406134.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KA63, A0A8C0MJX4, A0A8C0QQ09, A0A8I3N2T0
      Conserved Domains (1) summary
      pfam03054
      Location:5 → 383
      tRNA_Me_trans; tRNA methyl transferase

    2. XM_038550207.1 → XP_038406135.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    3. XM_038550208.1 → XP_038406136.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      19764367..19782082 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_538325.5 → XP_538325.2  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KA63, A0A8C0MJX4, A0A8C0QQ09, A0A8I3N2T0
      Conserved Domains (1) summary
      pfam03054
      Location:5 → 383
      tRNA_Me_trans; tRNA methyl transferase

    2. XM_014117279.3 → XP_013972754.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase

    3. XM_022424285.2 → XP_022279993.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      Conserved Domains (1) summary
      pfam03054
      Location:48 → 251
      tRNA_Me_trans; tRNA methyl transferase
    Nucleotide Protein
    Heading Accession and Version

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