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    IFT20 intraflagellar transport 20 [ Canis lupus familiaris (dog) ]

    Gene ID: 480620, updated on 5-Mar-2024

    Summary

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    Official Symbol
    IFT20provided by VGNC
    Official Full Name
    intraflagellar transport 20provided by VGNC
    Primary source
    VGNC:VGNC:54957
    See related
    Ensembl:ENSCAFG00845015286
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (43400250..43406984, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (41738040..41744762, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (42552794..42559508, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (42184523..42191233, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (42475746..42482460, complement)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene nemo like kinase Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 97 Neighboring gene TNF alpha induced protein 1 Neighboring gene DNA polymerase delta interacting protein 2 Neighboring gene transmembrane protein 199 Neighboring gene SEBOX homeobox

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in centrosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intraciliary transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of intraciliary transport particle B IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    intraflagellar transport protein 20 homolog
    Names
    intraflagellar transport 20 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      43400250..43406984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038677448.1 → XP_038533376.1  intraflagellar transport protein 20 homolog

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    2. XM_038677445.1 → XP_038533373.1  intraflagellar transport protein 20 homolog

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Related
      ENSCAFP00845021485.1, ENSCAFT00845027301.1
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    3. XM_038677447.1 → XP_038533375.1  intraflagellar transport protein 20 homolog

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      42184523..42191233 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038486387.1 → XP_038342315.1  intraflagellar transport protein 20 homolog

      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    2. XM_038486385.1 → XP_038342313.1  intraflagellar transport protein 20 homolog

      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    3. XM_038486386.1 → XP_038342314.1  intraflagellar transport protein 20 homolog

      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      42475746..42482460 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038612190.1 → XP_038468118.1  intraflagellar transport protein 20 homolog

      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    2. XM_038612188.1 → XP_038468116.1  intraflagellar transport protein 20 homolog

      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    3. XM_038612189.1 → XP_038468117.1  intraflagellar transport protein 20 homolog

      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      42552794..42559508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038548225.1 → XP_038404153.1  intraflagellar transport protein 20 homolog

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    2. XM_038548223.1 → XP_038404151.1  intraflagellar transport protein 20 homolog

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    3. XM_038548224.1 → XP_038404152.1  intraflagellar transport protein 20 homolog

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      41738040..41744762 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038610490.1 → XP_038466418.1  intraflagellar transport protein 20 homolog

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    2. XM_537740.7 → XP_537740.3  intraflagellar transport protein 20 homolog

      See identical proteins and their annotated locations for XP_537740.3

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20

    3. XM_003435305.5 → XP_003435353.1  intraflagellar transport protein 20 homolog

      See identical proteins and their annotated locations for XP_003435353.1

      UniProtKB/TrEMBL
      A0A8C0KHG8, A0A8C0N7T2, A0A8I3NWB5
      Conserved Domains (1) summary
      pfam14931
      Location:11 → 119
      IFT20; Intraflagellar transport complex B, subunit 20
    Nucleotide Protein
    Heading Accession and Version

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