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    SSX2IP SSX family member 2 interacting protein [ Canis lupus familiaris (dog) ]

    Gene ID: 479970, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SSX2IPprovided by VGNC
    Official Full Name
    SSX family member 2 interacting proteinprovided by VGNC
    Primary source
    VGNC:VGNC:46847
    See related
    Ensembl:ENSCAFG00845001479
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    ADIP
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (63683796..63803199)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (65793954..65913339)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (63689693..63808850)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (63291887..63332685)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (63181623..63300955)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidic acid receptor 3 Neighboring gene uncharacterized LOC119872283 Neighboring gene uncharacterized LOC111096423 Neighboring gene RNA transcription, translation and transport factor protein-like Neighboring gene uncharacterized LOC102155779 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111096427 Neighboring gene chitobiase Neighboring gene spermatogenesis associated 1 Neighboring gene G protein subunit gamma 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Afadin- and alpha-actinin-binding protein ADIP directly binds beta'-COP, a subunit of the coatomer complex. Asada M, et al. Biochem Biophys Res Commun, 2004 Aug 20. PMID 15358183

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    afadin- and alpha-actinin-binding protein; LOW QUALITY PROTEIN: afadin- and alpha-actinin-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      63683796..63803199
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038670276.1 → XP_038526204.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    2. XM_038670275.1 → XP_038526203.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    3. XM_038670273.1 → XP_038526201.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    4. XM_038670277.1 → XP_038526205.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    5. XM_038670274.1 → XP_038526202.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    6. XM_038670278.1 → XP_038526206.1  afadin- and alpha-actinin-binding protein isoform X7

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:93 → 368
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:38 → 181
      ADIP; Afadin- and alpha -actinin-Binding

    7. XM_038670268.1 → XP_038526196.1  afadin- and alpha-actinin-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVY4, A0A8I3RPZ4, A0A8P0NLF9
      Related
      ENSCAFP00845002041.1, ENSCAFT00845002564.1
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    8. XM_038670269.1 → XP_038526197.1  afadin- and alpha-actinin-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    9. XM_038670270.1 → XP_038526198.1  afadin- and alpha-actinin-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    10. XM_038670271.1 → XP_038526199.1  afadin- and alpha-actinin-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A8C0KLZ1, A0A8C0YVY4
      Related
      ENSCAFP00845002025.1, ENSCAFT00845002547.1
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    11. XM_038670272.1 → XP_038526200.1  afadin- and alpha-actinin-binding protein isoform X5

      UniProtKB/TrEMBL
      A0A8C0NBF7, A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    12. XM_038670279.1 → XP_038526207.1  afadin- and alpha-actinin-binding protein isoform X8

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      COG1196
      Location:63 → 331
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl23720
      Location:71 → 143
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      63291887..63332685
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038480194.1 → XP_038336122.1  LOW QUALITY PROTEIN: afadin- and alpha-actinin-binding protein isoform X4

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      63181623..63300955
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038605673.1 → XP_038461601.1  afadin- and alpha-actinin-binding protein isoform X6

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    2. XM_038605672.1 → XP_038461600.1  afadin- and alpha-actinin-binding protein isoform X6

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    3. XM_038605670.1 → XP_038461598.1  afadin- and alpha-actinin-binding protein isoform X6

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    4. XM_038605674.1 → XP_038461602.1  afadin- and alpha-actinin-binding protein isoform X6

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    5. XM_038605671.1 → XP_038461599.1  afadin- and alpha-actinin-binding protein isoform X6

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    6. XM_038605675.1 → XP_038461603.1  afadin- and alpha-actinin-binding protein isoform X7

      Conserved Domains (2) summary
      TIGR02168
      Location:93 → 368
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:38 → 181
      ADIP; Afadin- and alpha -actinin-Binding

    7. XM_038605664.1 → XP_038461592.1  afadin- and alpha-actinin-binding protein isoform X1

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    8. XM_038605665.1 → XP_038461593.1  afadin- and alpha-actinin-binding protein isoform X2

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    9. XM_038605666.1 → XP_038461594.1  afadin- and alpha-actinin-binding protein isoform X3

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    10. XM_038605667.1 → XP_038461595.1  afadin- and alpha-actinin-binding protein isoform X4

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    11. XM_038605669.1 → XP_038461597.1  afadin- and alpha-actinin-binding protein isoform X5

      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    12. XM_038605676.1 → XP_038461604.1  afadin- and alpha-actinin-binding protein isoform X8

      Conserved Domains (2) summary
      COG1196
      Location:63 → 331
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl23720
      Location:71 → 143
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      63689693..63808850
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038541533.1 → XP_038397461.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4

    2. XM_038541532.1 → XP_038397460.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4

    3. XM_038541530.1 → XP_038397458.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4

    4. XM_038541534.1 → XP_038397462.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4

    5. XM_038541531.1 → XP_038397459.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4

    6. XM_038541535.1 → XP_038397463.1  afadin- and alpha-actinin-binding protein isoform X7

      UniProtKB/TrEMBL
      A0A8C0YVY4

    7. XM_038541525.1 → XP_038397453.1  afadin- and alpha-actinin-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    8. XM_038541526.1 → XP_038397454.1  afadin- and alpha-actinin-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    9. XM_038541527.1 → XP_038397455.1  afadin- and alpha-actinin-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A8C0YVY4

    10. XM_038541528.1 → XP_038397456.1  afadin- and alpha-actinin-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    11. XM_038541529.1 → XP_038397457.1  afadin- and alpha-actinin-binding protein isoform X5

      UniProtKB/TrEMBL
      A0A8C0YVY4

    12. XM_038541536.1 → XP_038397464.1  afadin- and alpha-actinin-binding protein isoform X8

      UniProtKB/TrEMBL
      A0A8C0YVY4

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      65793954..65913339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022420566.2 → XP_022276274.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    2. XM_022420565.2 → XP_022276273.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    3. XM_022420563.2 → XP_022276271.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    4. XM_022420567.1 → XP_022276275.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    5. XM_022420564.2 → XP_022276272.1  afadin- and alpha-actinin-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    6. XM_022420568.2 → XP_022276276.1  afadin- and alpha-actinin-binding protein isoform X7

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:93 → 368
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:38 → 181
      ADIP; Afadin- and alpha -actinin-Binding

    7. XM_022420557.1 → XP_022276265.1  afadin- and alpha-actinin-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0YVY4, A0A8I3RPZ4, A0A8P0NLF9
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    8. XM_022420558.1 → XP_022276266.1  afadin- and alpha-actinin-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 401
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    9. XM_022420559.1 → XP_022276267.1  afadin- and alpha-actinin-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    10. XM_022420561.1 → XP_022276269.1  afadin- and alpha-actinin-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A8C0KLZ1, A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    11. XM_022420562.1 → XP_022276270.1  afadin- and alpha-actinin-binding protein isoform X5

      UniProtKB/TrEMBL
      A0A8C0NBF7, A0A8C0YVY4
      Conserved Domains (2) summary
      TIGR02168
      Location:126 → 397
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11559
      Location:63 → 214
      ADIP; Afadin- and alpha -actinin-Binding

    12. XM_022420569.1 → XP_022276277.1  afadin- and alpha-actinin-binding protein isoform X8

      UniProtKB/TrEMBL
      A0A8C0YVY4
      Conserved Domains (2) summary
      COG1196
      Location:63 → 331
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl23720
      Location:71 → 143
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
    Nucleotide Protein
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