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    PHF10 PHD finger protein 10 [ Canis lupus familiaris (dog) ]

    Gene ID: 475037, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PHF10provided by VGNC
    Official Full Name
    PHD finger protein 10provided by VGNC
    Primary source
    VGNC:VGNC:44480
    See related
    Ensembl:ENSCAFG00845021475
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (72836777..72859418, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (71715498..71738111, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (72419516..72442396, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (72188968..72211754, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (72030491..72053136, complement)

    Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene TSPY like 1 Neighboring gene uncharacterized LOC102155597 Neighboring gene chromosome 12 C6orf120 homolog Neighboring gene dynein light chain Tctex-type 2 Neighboring gene ER membrane associated RNA degradation

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of npBAF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051816.1 Reference ROS_Cfam_1.0

      Range
      72836777..72859418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038684444.1 → XP_038540372.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    2. XM_038684443.1 → XP_038540371.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    3. XM_038684445.1 → XP_038540373.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    4. XM_038684442.1 → XP_038540370.1  PHD finger protein 10 isoform X2

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:378 → 431
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:433 → 476
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 159
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    5. XM_038684441.1 → XP_038540369.1  PHD finger protein 10 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Related
      ENSCAFP00845029956.1, ENSCAFT00845038243.1
      Conserved Domains (3) summary
      cd15528
      Location:380 → 433
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:435 → 478
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 161
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    6. XM_038684446.1 → XP_038540374.1  PHD finger protein 10 isoform X4

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:292 → 345
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:347 → 390
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:1 → 73
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049272.1 Alternate UMICH_Zoey_3.1

      Range
      72188968..72211754 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038492704.1 → XP_038348632.1  PHD finger protein 10 isoform X3

      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    2. XM_038492703.1 → XP_038348631.1  PHD finger protein 10 isoform X3

      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    3. XM_038492705.1 → XP_038348633.1  PHD finger protein 10 isoform X3

      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    4. XM_038492702.1 → XP_038348630.1  PHD finger protein 10 isoform X2

      Conserved Domains (3) summary
      cd15528
      Location:378 → 431
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:433 → 476
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 159
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    5. XM_038492701.1 → XP_038348629.1  PHD finger protein 10 isoform X1

      Conserved Domains (3) summary
      cd15528
      Location:380 → 433
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:435 → 478
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 161
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    6. XM_038492706.1 → XP_038348634.1  PHD finger protein 10 isoform X4

      Conserved Domains (3) summary
      cd15528
      Location:292 → 345
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:347 → 390
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:1 → 73
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

      Range
      72030491..72053136 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038618889.1 → XP_038474817.1  PHD finger protein 10 isoform X3

      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    2. XM_038618888.1 → XP_038474816.1  PHD finger protein 10 isoform X3

      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    3. XM_038618890.1 → XP_038474818.1  PHD finger protein 10 isoform X3

      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    4. XM_038618887.1 → XP_038474815.1  PHD finger protein 10 isoform X2

      Conserved Domains (3) summary
      cd15528
      Location:378 → 431
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:433 → 476
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 159
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    5. XM_038618886.1 → XP_038474814.1  PHD finger protein 10 isoform X1

      Conserved Domains (3) summary
      cd15528
      Location:380 → 433
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:435 → 478
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 161
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    6. XM_038618891.1 → XP_038474819.1  PHD finger protein 10 isoform X4

      Conserved Domains (3) summary
      cd15528
      Location:292 → 345
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:347 → 390
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:1 → 73
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

      Range
      72419516..72442396 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038555017.1 → XP_038410945.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    2. XM_038555016.1 → XP_038410944.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    3. XM_038555018.1 → XP_038410946.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    4. XM_038555015.1 → XP_038410943.1  PHD finger protein 10 isoform X2

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:378 → 431
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:433 → 476
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 159
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    5. XM_038555014.1 → XP_038410942.1  PHD finger protein 10 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:380 → 433
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:435 → 478
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 161
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    6. XM_038555019.1 → XP_038410947.1  PHD finger protein 10 isoform X4

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:292 → 345
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:347 → 390
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:1 → 73
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      71715498..71738111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038671725.1 → XP_038527653.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    2. XM_014118230.3 → XP_013973705.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    3. XM_014118231.2 → XP_013973706.1  PHD finger protein 10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0L5J7, A0A8C0SAD8
      Conserved Domains (3) summary
      cd15528
      Location:333 → 386
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:388 → 431
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:26 → 114
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    4. XM_038671716.1 → XP_038527644.1  PHD finger protein 10 isoform X2

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:378 → 431
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:433 → 476
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 159
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    5. XM_038671712.1 → XP_038527640.1  PHD finger protein 10 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:380 → 433
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:435 → 478
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:73 → 161
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins

    6. XM_038671739.1 → XP_038527667.1  PHD finger protein 10 isoform X4

      UniProtKB/TrEMBL
      A0A8C0L5J7
      Conserved Domains (3) summary
      cd15528
      Location:292 → 345
      PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
      cd15529
      Location:347 → 390
      PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
      cd21085
      Location:1 → 73
      WH_NTD_PHF10; N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins
    Nucleotide Protein
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