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    GGTA1 glycoprotein alpha-galactosyltransferase 1 (inactive) [ Ovis aries (sheep) ]

    Gene ID: 443282, updated on 5-Mar-2024

    Summary

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    Gene symbol
    GGTA1
    Gene description
    glycoprotein alpha-galactosyltransferase 1 (inactive)
    See related
    EnsemblRapid:ENSOARG00020015864
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Also known as
    GGTA1P; GGTA2P
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (14379707..14451179)

    Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene DAB2 interacting protein Neighboring gene large ribosomal subunit protein uL30-like Neighboring gene uncharacterized LOC114113886 Neighboring gene uncharacterized LOC105612353 Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like Neighboring gene PC4 and SFRS1-interacting protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase
    Names
    alpha-1,3-galactosyltransferase
    glycoprotein, alpha-galactosyltransferase 1 pseudogene
    glycoprotein, alpha-galactosyltransferase 2, pseudogene
    NP_001009764.1
    XP_027821550.1
    XP_027821551.1
    XP_042101131.1
    XP_042101132.1
    XP_060267587.1
    XP_060267588.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009764.1 → NP_001009764.1  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase

      See identical proteins and their annotated locations for NP_001009764.1

      Status: PROVISIONAL

      Source sequence(s)
      AY447039
      UniProtKB/TrEMBL
      Q6SVU1
      Related
      ENSOARP00020043496.1, ENSOART00020065976.1
      Conserved Domains (1) summary
      pfam03414
      Location:84 → 367
      Glyco_transf_6; Glycosyltransferase family 6

    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      14379707..14451179
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027965750.3 → XP_027821551.1  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

      UniProtKB/TrEMBL
      W5PYG3
      Related
      ENSOARP00020039116.1, ENSOART00020081127.1
      Conserved Domains (1) summary
      cd02515
      Location:95 → 366
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

    2. XM_027965749.2 → XP_027821550.1  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

      UniProtKB/TrEMBL
      W5PYG3
      Conserved Domains (1) summary
      cd02515
      Location:95 → 366
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

    3. XM_060411604.1 → XP_060267587.1  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1

      Related
      ENSOARP00020020147.2, ENSOART00020024303.2

    4. XM_060411605.1 → XP_060267588.1  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

      UniProtKB/TrEMBL
      W5PYG3

    5. XM_042245197.1 → XP_042101131.1  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

      UniProtKB/TrEMBL
      W5PYG3
      Conserved Domains (1) summary
      cd02515
      Location:95 → 366
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

    6. XM_042245198.1 → XP_042101132.1  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

      UniProtKB/TrEMBL
      W5PYG3
      Conserved Domains (1) summary
      cd02515
      Location:95 → 366
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
    Nucleotide Protein Strain
    Heading Accession and Version

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