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    RpS3A Ribosomal protein S3A [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43768, updated on 4-Apr-2024

    Summary

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    Official Symbol
    RpS3Aprovided by FlyBase
    Official Full Name
    Ribosomal protein S3Aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0017545
    Locus tag
    Dmel_CG2168
    See related
    AllianceGenome:FB:FBgn0017545
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Liang-2.29; C3; CG2168; chr4:86830..87021; chr4:87101..87234; chr4:87503..87595; clone 2.29; Dmel\CG2168; l(4)102ABa; M(4)101; M(4)57g; M(4)[57g]; M57g; M[57g]; Rps3A; RpS3a; RPS3a; RPS3A; Rsp3A; S1e
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; organism; and ovary. Used to study intrinsic cardiomyopathy. Orthologous to human RPS3A (ribosomal protein S3A). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    101F1-101F1; 4-0 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (65225..67207, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (85851..87833, complement)

    Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44440 Neighboring gene antisense RNA:CR43957 Neighboring gene cubitus interruptus Neighboring gene ncRNA Neighboring gene pangolin Neighboring gene Ankyrin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chromosomal position effects reveal different cis-acting requirements for rDNA transcription and sex chromosome pairing in Drosophila melanogaster. Briscoe A Jr, et al. Genetics, 2000 Jul. PMID 10880481, Free PMC Article
    2. Drosophila RpS3a, a novel Minute gene situated between the segment polarity genescubitus interruptus and dTCF. van Beest M, et al. Nucleic Acids Res, 1998 Oct 1. PMID 9742251, Free PMC Article
    3. Antisense suppression of the putative ribosomal protein S3A gene disrupts ovarian development in Drosophila melanogaster. Reynaud E, et al. Mol Gen Genet, 1997 Oct. PMID 9393444
    4. Analysis of two cosmid clones from chromosome 4 of Drosophila melanogaster reveals two new genes amid an unusual arrangement of repeated sequences. Locke J, et al. Genome Res, 1999 Feb. PMID 10022978, Free PMC Article
    5. Genetic organization of the ci-M-pan region on chromosome IV in Drosophila melanogaster. Kronhamn J, et al. Genome, 1999 Dec. PMID 10659782

    See all (85) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal protein S3A
    Names
    CG2168-PA
    CG2168-PB
    CG2168-PF
    Minute(4)101
    RpS3A-PA
    RpS3A-PB
    RpS3A-PF
    clone 3
    ribosomal protein S3a
    ribosomal protein S3alpha

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004353.4 Reference assembly

      Range
      65225..67207 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001258475.2 → NP_001245404.1  ribosomal protein S3A, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245404.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C4IXY1, E4NKK4, H0RNB6, H9XVL9, O44389, P55830, Q8IMA9, Q8IMB0, Q8SZD2, Q9V4A9
      Conserved Domains (1) summary
      pfam01015
      Location:21 → 224
      Ribosomal_S3Ae; Ribosomal S3Ae family

    2. NM_166714.4 → NP_726518.1  ribosomal protein S3A, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726518.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P55830
      Related
      FBpp0088243
      Conserved Domains (1) summary
      pfam01015
      Location:14 → 174
      Ribosomal_S3Ae; Ribosomal S3Ae family

    3. NM_079879.4 → NP_524618.1  ribosomal protein S3A, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524618.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C4IXY1, E4NKK4, H0RNB6, H9XVL9, O44389, P55830, Q8IMA9, Q8IMB0, Q8SZD2, Q9V4A9
      Related
      FBpp0088242
      Conserved Domains (1) summary
      pfam01015
      Location:21 → 224
      Ribosomal_S3Ae; Ribosomal S3Ae family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    4V6W_AB.1
    P55830.4 P55830

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