YKT6 YKT6 v-SNARE homolog (S. cerevisiae) [Gallus gallus (chicken)] - Gene

Summary

Symbol: YKT6provided by CGNC
Full Name: YKT6 v-SNARE homolog (S. cerevisiae)provided by CGNC
Primary source: CGNC:9920
See related: Ensembl:ENSGALG00010018951
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 22

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	22	NC_052553.1 (4538394..4542017, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	22	NC_052594.1 (4585987..4589607, complement)

Chromosome 22 - NC_052553.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables SNAP receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: synaptobrevin homolog YKT6

NP_001107216.1

EC 2.3.1.-

XP_046759328.1

EC 2.3.1.-

XP_046787605.1

EC 2.3.1.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001113744.2 → NP_001107216.1 synaptobrevin homolog YKT6

Status: VALIDATED

Source sequence(s)

JAENSK010000335

UniProtKB/TrEMBL

A0A1D5PH43

Related

ENSGALP00010027338.1, ENSGALT00010045868.1

Conserved Domains (3) summary

COG5143
Location:3 → 198

SNC1; Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion]

cd15867
Location:136 → 195

R-SNARE_YKT6; SNARE motif of YKT6

pfam13774
Location:44 → 114

Longin; Regulated-SNARE-like domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052553.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

4538394..4542017 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)