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    ZFYVE27 zinc finger FYVE-type containing 27 [ Gallus gallus (chicken) ]

    Gene ID: 423839, updated on 11-Apr-2024

    Summary

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    Official Symbol
    ZFYVE27provided by CGNC
    Official Full Name
    zinc finger FYVE-type containing 27provided by CGNC
    Primary source
    CGNC:5682
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (23088251..23093488, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (22979494..22984733, complement)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene golgin A7 family member B Neighboring gene secreted frizzled related protein 5 Neighboring gene MARVEL domain containing 1 Neighboring gene arginine vasopressin induced 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum tubular network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotrophin TRK receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of axon extension IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum tubular network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in growth cone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protrudin
    Names
    zinc finger FYVE domain-containing protein 27
    zinc finger, FYVE domain containing 27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039304.2 → NP_001034393.2  protrudin

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000232
      UniProtKB/Swiss-Prot
      Q5ZL36
      Conserved Domains (1) summary
      cd15723
      Location:344 → 404
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      23088251..23093488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015288631.4 → XP_015144117.2  protrudin isoform X1

      UniProtKB/Swiss-Prot
      Q5ZL36
      Conserved Domains (1) summary
      cd15723
      Location:351 → 411
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      22979494..22984733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046920300.1 → XP_046776256.1  protrudin isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZL36.1 GenPept UniProtKB/Swiss-Prot:Q5ZL36

    Gene LinkOut

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