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    ANKRD17 ankyrin repeat domain 17 [ Gallus gallus (chicken) ]

    Gene ID: 422651, updated on 3-Apr-2024

    Summary

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    Official Symbol
    ANKRD17provided by CGNC
    Official Full Name
    ankyrin repeat domain 17provided by CGNC
    Primary source
    CGNC:8845
    See related
    Ensembl:ENSGALG00010004443
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (50235581..50298657, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (50240047..50319112, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110678 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 3 Neighboring gene COX18, cytochrome c oxidase assembly factor Neighboring gene uncharacterized LOC124417933 Neighboring gene albumin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 17
    Names
    ankyrin repeat domain protein 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      50235581..50298657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004941181.5 → XP_004941238.1  ankyrin repeat domain-containing protein 17 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJW0, A0A8V0XMM8
      Related
      ENSGALP00010006059.1, ENSGALT00010010371.1
      Conserved Domains (8) summary
      PHA03095
      Location:120 → 440
      PHA03095; ankyrin-like protein; Provisional
      PHA03247
      Location:1737 → 2115
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:315 → 344
      ANK; ANK repeat [structural motif]
      pfam03154
      Location:1961 → 2330
      Atrophin-1; Atrophin-1 family
      pfam03938
      Location:674 → 773
      OmpH; Outer membrane protein (OmpH-like)
      pfam12796
      Location:448 → 539
      Ank_2; Ankyrin repeats (3 copies)
      cd22502
      Location:1607 → 1677
      KH-I_ANKRD17; type I K homology (KH) RNA-binding domain found in ankyrin repeat domain-containing protein 17 (ANKRD17) and similar proteins
      cl39094
      Location:1033 → 1319
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_040699742.2 → XP_040555676.1  ankyrin repeat domain-containing protein 17 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XJW0
      Conserved Domains (8) summary
      smart00322
      Location:1601 → 1665
      KH; K homology RNA-binding domain
      PHA03095
      Location:111 → 431
      PHA03095; ankyrin-like protein; Provisional
      PHA03247
      Location:1759 → 2205
      PHA03247; large tegument protein UL36; Provisional
      COG0666
      Location:335 → 556
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      TIGR04523
      Location:645 → 758
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      sd00045
      Location:306 → 335
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:537 → 588
      Ank_4; Ankyrin repeats (many copies)
      cl39094
      Location:1024 → 1310
      Ank_2; Ankyrin repeats (3 copies)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      50240047..50319112 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046917053.1 → XP_046773009.1  ankyrin repeat domain-containing protein 17 isoform X3

    2. XM_046917052.1 → XP_046773008.1  ankyrin repeat domain-containing protein 17 isoform X3

    3. XM_040670853.2 → XP_040526787.1  ankyrin repeat domain-containing protein 17 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJW0, A0A8V0XMM8
      Conserved Domains (8) summary
      PHA03095
      Location:120 → 440
      PHA03095; ankyrin-like protein; Provisional
      PHA03247
      Location:1737 → 2115
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:315 → 344
      ANK; ANK repeat [structural motif]
      pfam03154
      Location:1961 → 2330
      Atrophin-1; Atrophin-1 family
      pfam03938
      Location:674 → 773
      OmpH; Outer membrane protein (OmpH-like)
      pfam12796
      Location:448 → 539
      Ank_2; Ankyrin repeats (3 copies)
      cd22502
      Location:1607 → 1677
      KH-I_ANKRD17; type I K homology (KH) RNA-binding domain found in ankyrin repeat domain-containing protein 17 (ANKRD17) and similar proteins
      cl39094
      Location:1033 → 1319
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_040670856.2 → XP_040526790.1  ankyrin repeat domain-containing protein 17 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XJW0
      Conserved Domains (8) summary
      smart00322
      Location:1601 → 1665
      KH; K homology RNA-binding domain
      PHA03095
      Location:111 → 431
      PHA03095; ankyrin-like protein; Provisional
      PHA03247
      Location:1759 → 2205
      PHA03247; large tegument protein UL36; Provisional
      COG0666
      Location:335 → 556
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      TIGR04523
      Location:645 → 758
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      sd00045
      Location:306 → 335
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:537 → 588
      Ank_4; Ankyrin repeats (many copies)
      cl39094
      Location:1024 → 1310
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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