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    COPE coatomer protein complex subunit epsilon [ Gallus gallus (chicken) ]

    Gene ID: 420117, updated on 5-Mar-2024

    Summary

    Symbol
    COPEprovided by CGNC
    Full Name
    coatomer protein complex subunit epsilonprovided by CGNC
    Primary source
    CGNC:2286
    See related
    Ensembl:ENSGALG00010028170
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
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    Genomic context

    See COPE in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (4170255..4175040)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (3732772..3737561)

    Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene SURP and G-patch domain containing 2 Neighboring gene homer scaffolding protein 3 Neighboring gene DEAD-box helicase 49 Neighboring gene ceramide synthase 1 Neighboring gene growth differentiation factor 3 Neighboring gene UPF1, RNA helicase and ATPase Neighboring gene uncharacterized LOC124417445

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    coatomer subunit epsilon
    Names
    epsilon-COP
    epsilon-coat protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006339.2NP_001006339.1  coatomer subunit epsilon

      See identical proteins and their annotated locations for NP_001006339.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000376
      UniProtKB/Swiss-Prot
      Q5ZIK9
      UniProtKB/TrEMBL
      A0A8V1ACR8
      Related
      ENSGALP00010042003.1, ENSGALT00010068260.1
      Conserved Domains (2) summary
      pfam04733
      Location:17305
      Coatomer_E; Coatomer epsilon subunit
      sd00006
      Location:185210
      TPR; TPR repeat [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4170255..4175040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3732772..3737561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)