U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    FANCA Fanconi anemia complementation group A [ Gallus gallus (chicken) ]

    Gene ID: 415854, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Symbol
    FANCAprovided by CGNC
    Full Name
    Fanconi anemia complementation group Aprovided by CGNC
    Primary source
    CGNC:317
    See related
    Ensembl:ENSGALG00010008083
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 11
    Exon count:
    46
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (18425947..18461691, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (18773925..18808981, complement)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase 10 Neighboring gene microRNA 6667 Neighboring gene spermatogenesis associated 2 like Neighboring gene VPS9 domain containing 1 Neighboring gene zinc finger protein 276 Neighboring gene uncharacterized LOC121111700 Neighboring gene spire-type actin nucleation factor 2 Neighboring gene transcription factor 25 Neighboring gene melanocortin 1 receptor

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Non-coding RNAs revealed during identification of genes involved in chicken immune responses. Ahanda ML, et al. Immunogenetics, 2009 Jan. PMID 19009289
    2. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
    3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of regulatory T cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Fanconi anaemia nuclear complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Fanconi anemia group A protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134359.3 → NP_001127831.2  Fanconi anemia group A protein isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000248
      Related
      ENSGALP00010010833.1, ENSGALT00010019285.1

    2. NM_001398182.1 → NP_001385111.1  Fanconi anemia group A protein isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000248

    3. NM_001398183.1 → NP_001385112.1  Fanconi anemia group A protein isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000248

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      18425947..18461691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046899512.1 → XP_046755468.1  Fanconi anemia group A protein isoform X14

    2. XM_046899509.1 → XP_046755465.1  Fanconi anemia group A protein isoform X14

    3. XM_046899508.1 → XP_046755464.1  Fanconi anemia group A protein isoform X14

    4. XM_046899510.1 → XP_046755466.1  Fanconi anemia group A protein isoform X14

    5. XM_046899511.1 → XP_046755467.1  Fanconi anemia group A protein isoform X14

    6. XM_046899498.1 → XP_046755454.1  Fanconi anemia group A protein isoform X6

    7. XM_046899495.1 → XP_046755451.1  Fanconi anemia group A protein isoform X3

    8. XM_046899494.1 → XP_046755450.1  Fanconi anemia group A protein isoform X2

    9. XM_046899507.1 → XP_046755463.1  Fanconi anemia group A protein isoform X14

    10. XM_046899503.1 → XP_046755459.1  Fanconi anemia group A protein isoform X11

    11. XM_046899500.1 → XP_046755456.1  Fanconi anemia group A protein isoform X8

    12. XM_046899502.1 → XP_046755458.1  Fanconi anemia group A protein isoform X10

    13. XM_046899499.1 → XP_046755455.1  Fanconi anemia group A protein isoform X7

    14. XM_046899501.1 → XP_046755457.1  Fanconi anemia group A protein isoform X9

    15. XM_046899497.1 → XP_046755453.1  Fanconi anemia group A protein isoform X5

    16. XM_046899504.1 → XP_046755460.1  Fanconi anemia group A protein isoform X12

    17. XM_046899496.1 → XP_046755452.1  Fanconi anemia group A protein isoform X4

    18. XM_040707108.2 → XP_040563042.1  Fanconi anemia group A protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y403

    19. XM_046899506.1 → XP_046755462.1  Fanconi anemia group A protein isoform X13

    20. XM_046899505.1 → XP_046755461.1  Fanconi anemia group A protein isoform X13

    RNA

    1. XR_006931149.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      18773925..18808981 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925632.1 → XP_046781588.1  Fanconi anemia group A protein isoform X14

    2. XM_046925629.1 → XP_046781585.1  Fanconi anemia group A protein isoform X14

    3. XM_046925630.1 → XP_046781586.1  Fanconi anemia group A protein isoform X14

    4. XM_046925631.1 → XP_046781587.1  Fanconi anemia group A protein isoform X14

    5. XM_046925618.1 → XP_046781574.1  Fanconi anemia group A protein isoform X6

    6. XM_046925614.1 → XP_046781570.1  Fanconi anemia group A protein isoform X3

    7. XM_046925613.1 → XP_046781569.1  Fanconi anemia group A protein isoform X2

    8. XM_046925628.1 → XP_046781584.1  Fanconi anemia group A protein isoform X14

    9. XM_046925623.1 → XP_046781579.1  Fanconi anemia group A protein isoform X11

    10. XM_046925620.1 → XP_046781576.1  Fanconi anemia group A protein isoform X8

    11. XM_046925622.1 → XP_046781578.1  Fanconi anemia group A protein isoform X10

    12. XM_046925619.1 → XP_046781575.1  Fanconi anemia group A protein isoform X7

    13. XM_046925621.1 → XP_046781577.1  Fanconi anemia group A protein isoform X9

    14. XM_046925617.1 → XP_046781573.1  Fanconi anemia group A protein isoform X5

    15. XM_046925624.1 → XP_046781580.1  Fanconi anemia group A protein isoform X12

    16. XM_046925615.1 → XP_046781571.1  Fanconi anemia group A protein isoform X4

    17. XM_046925612.1 → XP_046781568.1  Fanconi anemia group A protein isoform X1

    18. XM_046925626.1 → XP_046781582.1  Fanconi anemia group A protein isoform X13

    19. XM_046925625.1 → XP_046781581.1  Fanconi anemia group A protein isoform X13

    RNA

    1. XR_006935808.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.