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    fam43a family with sequence similarity 43 member A [ Danio rerio (zebrafish) ]

    Gene ID: 334166, updated on 27-Mar-2024

    Summary

    Official Symbol
    fam43aprovided by ZNC
    Official Full Name
    family with sequence similarity 43 member Aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6098
    See related
    Ensembl:ENSDARG00000043009 AllianceGenome:ZFIN:ZDB-GENE-030131-6098
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fi34c08; zgc:77057; im:7152141; wu:fi34c08
    Summary
    Is expressed in several structures, including blood vessel; nervous system; optic primordium; optic vesicle; and solid lens vesicle. Orthologous to human FAM43A (family with sequence similarity 43 member A). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (34235372..34237802)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (33972940..33975370)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 44 Neighboring gene uncharacterized LOC103911849 Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene xyloside xylosyltransferase 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_214705.1NP_999870.1  protein FAM43A

      See identical proteins and their annotated locations for NP_999870.1

      Status: PROVISIONAL

      Source sequence(s)
      BC067169
      UniProtKB/TrEMBL
      A0A8M1PJU0, Q6NXA7
      Related
      ENSDARP00000063149.3, ENSDART00000063150.5
      Conserved Domains (1) summary
      pfam14719
      Location:67252
      PID_2; Phosphotyrosine interaction domain (PTB/PID)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      34235372..34237802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)