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    Pnma8b PNMA family member 8B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 308393, updated on 5-Mar-2024

    Summary

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    Official Symbol
    Pnma8bprovided by RGD
    Official Full Name
    PNMA family member 8Bprovided by RGD
    Primary source
    RGD:1560435
    See related
    Ensembl:ENSRNOG00000016863 AllianceGenome:RGD:1560435
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Pnmal2; RGD1560435
    Summary
    Orthologous to human PNMA8B (PNMA family member 8B). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    1q21
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (86749840..86754605)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (77622287..77626525)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (78876205..78878779)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene prostaglandin I2 receptor Neighboring gene calmodulin 3 Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene PNMA family member 8A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis. Na CH, et al. J Proteome Res, 2012 Sep 7. PMID 22871113, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    paraneoplastic antigen-like protein 8B
    Names
    PNMA-like 2
    PNMA-like protein 2
    paraneoplastic Ma antigen family member 8B
    paraneoplastic Ma antigen family-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001107481.1 → NP_001100951.1  paraneoplastic antigen-like protein 8B

      See identical proteins and their annotated locations for NP_001100951.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473979
      UniProtKB/TrEMBL
      A6J8E3, D3ZQN3
      Related
      ENSRNOP00000022610.4, ENSRNOT00000022610.5
      Conserved Domains (1) summary
      pfam14893
      Location:1 → 114
      PNMA

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      86749840..86754605
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039111197.2 → XP_038967125.1  paraneoplastic antigen-like protein 8B isoform X1

      UniProtKB/TrEMBL
      A6J8E3, D3ZQN3
      Conserved Domains (1) summary
      pfam14893
      Location:1 → 114
      PNMA
    Nucleotide Protein Strain
    Heading Accession and Version

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