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    IGKV1D-22 immunoglobulin kappa variable 1D-22 (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 28899, updated on 10-Oct-2023

    Summary

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    Official Symbol
    IGKV1D-22provided by HGNC
    Official Full Name
    immunoglobulin kappa variable 1D-22 (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:5750
    See related
    Ensembl:ENSG00000253365 IMGT/GENE-DB:IGKV1D-22; AllianceGenome:HGNC:5750
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    A9; IGKV1D22
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    Genomic context

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    Location:
    2p11.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (90010741..90011208)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (90566266..90566733)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (90049551..90050018)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa locus Neighboring gene immunoglobulin kappa variable 2D-24 (non-functional) Neighboring gene immunoglobulin kappa variable 2D-23 (pseudogene) Neighboring gene immunoglobulin kappa variable 6D-21 (non-functional) Neighboring gene immunoglobulin kappa variable 3D-20

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The human immunoglobulin kappa locus: pseudogenes, unique and repetitive sequences. Schäble K, et al. Biol Chem Hoppe Seyler, 1994 Mar. PMID 8011175
    2. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. Kawasaki K, et al. Eur J Immunol, 2001 Apr. PMID 11298326

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_000833.2 

      Range
      237648..238115 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      90010741..90011208
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      90566266..90566733
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases