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    CBY1 chibby family member 1, beta catenin antagonist [ Bos taurus (cattle) ]

    Gene ID: 282859, updated on 4-Apr-2024

    Summary

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    Official Symbol
    CBY1provided by VGNC
    Official Full Name
    chibby family member 1, beta catenin antagonistprovided by VGNC
    Primary source
    VGNC:VGNC:26822
    See related
    BGD:BT21285; Ensembl:ENSBTAG00000006588
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CBY1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (110294871..110304273)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene DNA meiotic recombinase 1 Neighboring gene uncharacterized LOC132345356 Neighboring gene family with sequence similarity 227 member A Neighboring gene U6 spliceosomal RNA Neighboring gene translocase of outer mitochondrial membrane 22 Neighboring gene Josephin domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein chibby homolog 1
    Names
    PIGEA-14
    PKD2 interactor, Golgi and endoplasmic reticulum-associated 1
    cytosolic leucine-rich protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174739.4 → NP_777164.1  protein chibby homolog 1

      See identical proteins and their annotated locations for NP_777164.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120055
      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1
      Related
      ENSBTAP00000008651.3, ENSBTAT00000008651.5
      Conserved Domains (1) summary
      pfam14645
      Location:1 → 114
      Chibby; Chibby family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      110294871..110304273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005207306.5 → XP_005207363.1  protein chibby homolog 1 isoform X2

      Related
      ENSBTAP00000100827.1, ENSBTAT00000094651.1
      Conserved Domains (1) summary
      pfam14645
      Location:26 → 139
      Chibby; Chibby family

    2. XM_024991388.2 → XP_024847156.1  protein chibby homolog 1 isoform X1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1
      Conserved Domains (1) summary
      pfam14645
      Location:1 → 114
      Chibby; Chibby family

    3. XM_005207308.5 → XP_005207365.1  protein chibby homolog 1 isoform X3

      See identical proteins and their annotated locations for XP_005207365.1

      Conserved Domains (1) summary
      pfam14645
      Location:8 → 121
      Chibby; Chibby family

    4. XM_059886130.1 → XP_059742113.1  protein chibby homolog 1 isoform X1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1

    5. XM_059886131.1 → XP_059742114.1  protein chibby homolog 1 isoform X1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1

    6. XM_015471373.2 → XP_015326859.1  protein chibby homolog 1 isoform X1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1
      Conserved Domains (1) summary
      pfam14645
      Location:1 → 114
      Chibby; Chibby family

    7. XM_005207311.3 → XP_005207368.1  protein chibby homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005207368.1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1
      Conserved Domains (1) summary
      pfam14645
      Location:1 → 114
      Chibby; Chibby family

    8. XM_024991385.2 → XP_024847153.1  protein chibby homolog 1 isoform X1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1
      Conserved Domains (1) summary
      pfam14645
      Location:1 → 114
      Chibby; Chibby family

    9. XM_010805704.4 → XP_010804006.1  protein chibby homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_010804006.1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1
      Conserved Domains (1) summary
      pfam14645
      Location:1 → 114
      Chibby; Chibby family

    10. XM_005207310.5 → XP_005207367.1  protein chibby homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005207367.1

      UniProtKB/Swiss-Prot
      Q0P5H0, Q8MJK1
      Conserved Domains (1) summary
      pfam14645
      Location:1 → 114
      Chibby; Chibby family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MJK1.1 GenPept UniProtKB/Swiss-Prot:Q8MJK1

    Gene LinkOut

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