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    Lhx3 LIM homeobox 3 [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101723708, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Lhx3
    Gene description
    LIM homeobox 3
    See related
    Ensembl:ENSHGLG00000013639
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624760.1 (1428496..1435414, complement)

    NW_004624760.1Genomic Context describing neighboring genes Neighboring gene NACC family member 2 Neighboring gene uncharacterized LOC101722544 Neighboring gene transmembrane protein 250 Neighboring gene quiescin sulfhydryl oxidase 2 Neighboring gene coiled-coil domain containing 187

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624760 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LIM/homeobox protein Lhx3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624760.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      1428496..1435414 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004848891.2 → XP_004848948.1  LIM/homeobox protein Lhx3 isoform X2

      UniProtKB/TrEMBL
      G5B6B9
      Related
      ENSHGLP00000019036.1, ENSHGLT00000019226.1
      Conserved Domains (3) summary
      cd09376
      Location:93 → 148
      LIM2_Lhx3_Lhx4; The second LIM domain of Lhx3-Lhx4 family
      cd09467
      Location:31 → 85
      LIM1_Lhx3b; The first LIM domain of Lhx3b
      pfam00046
      Location:163 → 216
      Homeobox; Homeobox domain

    2. XM_004848890.2 → XP_004848947.1  LIM/homeobox protein Lhx3 isoform X1

      UniProtKB/TrEMBL
      G5B6B9
      Related
      ENSHGLP00000019037.1, ENSHGLT00000019227.1
      Conserved Domains (3) summary
      cd09376
      Location:95 → 150
      LIM2_Lhx3_Lhx4; The second LIM domain of Lhx3-Lhx4 family
      cd09467
      Location:33 → 87
      LIM1_Lhx3b; The first LIM domain of Lhx3b
      pfam00046
      Location:165 → 218
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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