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    Trdmt1 tRNA aspartic acid methyltransferase 1 [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101719891, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Trdmt1
    Gene description
    tRNA aspartic acid methyltransferase 1
    See related
    Ensembl:ENSHGLG00000004178
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624796.1 (10630982..10712689)

    NW_004624796.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 Neighboring gene eukaryotic translation initiation factor 5 pseudogene Neighboring gene vimentin Neighboring gene uncharacterized LOC110344915 Neighboring gene cubilin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624796 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (cytosine(38)-C(5))-methyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624796.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      10630982..10712689
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021240502.1 → XP_021096161.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X2

      UniProtKB/TrEMBL
      G5BFE5
      Conserved Domains (1) summary
      cd00315
      Location:4 → 384
      Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

    2. XM_004859970.3 → XP_004860027.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X1

      UniProtKB/TrEMBL
      G5BFE5
      Related
      ENSHGLP00000005718.1, ENSHGLT00000005790.1
      Conserved Domains (1) summary
      cd00315
      Location:4 → 391
      Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

    3. XM_004859973.3 → XP_004860030.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X3

      Conserved Domains (1) summary
      cl17173
      Location:4 → 179
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    RNA

    1. XR_002387869.1 RNA Sequence

    2. XR_002387865.1 RNA Sequence

    3. XR_002387866.1 RNA Sequence

    4. XR_002387867.1 RNA Sequence

    5. XR_002387868.1 RNA Sequence

    6. XR_002387870.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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