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    Cry1 cryptochrome circadian regulator 1 [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101719696, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Cry1
    Gene description
    cryptochrome circadian regulator 1
    See related
    Ensembl:ENSHGLG00000007148
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (2465999..2529251)

    NW_004624750.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110349118 Neighboring gene uncharacterized LOC106009406 Neighboring gene cold shock domain-containing protein E1 pseudogene Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene transmembrane protein 263 Neighboring gene RIC8 guanine nucleotide exchange factor B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in circadian regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in entrainment of circadian clock by photoperiod IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cryptochrome-1
    Names
    cryptochrome 1 (photolyase-like)
    cryptochrome circadian clock 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      2465999..2529251
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021258363.1 → XP_021114022.1  cryptochrome-1 isoform X1

      Conserved Domains (2) summary
      pfam03441
      Location:343 → 541
      FAD_binding_7; FAD binding domain of DNA photolyase
      cl27275
      Location:6 → 546
      DNA_photolyase; DNA photolyase

    2. XM_021258364.1 → XP_021114023.1  cryptochrome-1 isoform X2

      Conserved Domains (2) summary
      pfam03441
      Location:343 → 541
      FAD_binding_7; FAD binding domain of DNA photolyase
      cl27275
      Location:6 → 546
      DNA_photolyase; DNA photolyase

    3. XM_004844794.2 → XP_004844851.1  cryptochrome-1 isoform X3

      Conserved Domains (3) summary
      COG0415
      Location:6 → 491
      PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
      pfam00875
      Location:5 → 153
      DNA_photolyase; DNA photolyase
      pfam03441
      Location:213 → 486
      FAD_binding_7; FAD binding domain of DNA photolyase

    4. XM_004844795.2 → XP_004844852.1  cryptochrome-1 isoform X4

      Related
      ENSHGLP00000009964.1, ENSHGLT00000010074.1
      Conserved Domains (3) summary
      COG0415
      Location:6 → 491
      PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
      pfam00875
      Location:5 → 153
      DNA_photolyase; DNA photolyase
      pfam03441
      Location:213 → 486
      FAD_binding_7; FAD binding domain of DNA photolyase
    Nucleotide Protein
    Heading Accession and Version

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